Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
721Q6DDF0    495   WDR37_XENLA WD repeat-containing protein 37 O...1163.3     33.9     26     46
722P31146    461   COR1A_HUMAN Coronin-1A OS=Homo sapiens (Human...1040.2     38.1     27     42GO:0005884; C:actin filament; IDA:UniProtKB.::GO:0030864; C:cortical actin cytoskeleton; IDA:UniProtKB.::GO:0030027; C:lamellipodium; IDA:UniProtKB.::GO:0001891; C:phagocytic cup; IDA:UniProtKB.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; IDA:UniProtKB.::GO:0043548; F:phosphatidylinositol 3-kinase binding; IDA:UniProtKB.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0042803; F:protein homodimerization activity; IDA:UniProtKB.
GO:0031589; P:cell-substrate adhesion; IMP:UniProtKB.::GO:0045087; P:innate immune response; NAS:UniProtKB.::GO:0030595; P:leukocyte chemotaxis; IBA:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; IDA:UniProtKB.::GO:0001845; P:phagolysosome assembly; IMP:UniProtKB.::GO:0050918; P:positive chemotaxis; IDA:UniProtKB.::GO:0008360; P:regulation of cell shape; IBA:RefGenome.::GO:0032796; P:uropod organization; IBA:RefGenome.
723Q54DS4    1823   Y2056_DICDI WD repeat-containing protein DDB_...1100.82     36.2     25     54
724Q3KQ62    314   WDR83_XENLA WD repeat domain-containing prote...1680.12     38.5     29     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
725P79987    1019   HIRA_CHICK Protein HIRA OS=Gallus gallus (Chi...1450.001     45.4     28     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
726Q5ZJW8    720   DTL_CHICK Denticleless protein homolog OS=Gal...2930.087     39.3     21     42GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
727Q7S7N3    446   HAT2_NEUCR Histone acetyltransferase type B s...2160.000002     53.9     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
728Q6ZPG2    1874   WDR90_MOUSE WD repeat-containing protein 90 O...875.6     33.5     28     47
729A4IIX9    494   WDR37_XENTR WD repeat-containing protein 37 O...1163.8     33.9     25     46
730Q91ZN1    461   COR1A_RAT Coronin-1A OS=Rattus norvegicus (Ra...980.18     38.1     26     43GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0030027; C:lamellipodium; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IBA:RefGenome.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030595; P:leukocyte chemotaxis; IBA:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; IBA:RefGenome.::GO:0001845; P:phagolysosome assembly; IBA:RefGenome.::GO:0050918; P:positive chemotaxis; IBA:RefGenome.::GO:0008360; P:regulation of cell shape; IBA:RefGenome.::GO:0030217; P:T cell differentiation; NAS:RGD.::GO:0032796; P:uropod organization; IBA:RefGenome.
731O89053    461   COR1A_MOUSE Coronin-1A OS=Mus musculus (Mouse...980.18     38.1     26     43GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0001772; C:immunological synapse; IDA:MGI.::GO:0030027; C:lamellipodium; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IBA:RefGenome.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; IDA:MGI.
GO:0007015; P:actin filament organization; IMP:MGI.::GO:0006816; P:calcium ion transport; IMP:MGI.::GO:0048873; P:homeostasis of number of cells within a tissue; IMP:MGI.::GO:0030595; P:leukocyte chemotaxis; IMP:MGI.::GO:0051126; P:negative regulation of actin nucleation; IBA:RefGenome.::GO:0001845; P:phagolysosome assembly; IBA:RefGenome.::GO:0050918; P:positive chemotaxis; IBA:RefGenome.::GO:0030335; P:positive regulation of cell migration; IMP:MGI.::GO:0042102; P:positive regulation of T cell proliferation; IMP:MGI.::GO:0030833; P:regulation of actin filament polymerization; IMP:MGI.::GO:0008360; P:regulation of cell shape; IMP:MGI.::GO:0034097; P:response to cytokine stimulus; IMP:MGI.::GO:0043029; P:T cell homeostasis; IMP:MGI.::GO:0032796; P:uropod organization; IMP:MGI.
732Q6P315    425   RBBP7_XENTR Histone-binding protein RBBP7 OS=...1730.00000002     60.1     25     46GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
733C7GWC1    494   LIS1_YEAS2 Nuclear distribution protein PAC1 ...1530.039     40     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
734A6ZZZ8    645   CAF4_YEAS7 CCR4-associated factor 4 OS=Saccha...1240.0007     45.8     29     48GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
735Q8AVH1    425   RBBP7_XENLA Histone-binding protein RBBP7 OS=...1730.00000002     60.1     25     46GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
736P36130    643   CAF4_YEAST CCR4-associated factor 4 OS=Saccha...1240.002     45.1     28     48GO:0030014; C:CCR4-NOT complex; IDA:SGD.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.
737Q24572    430   CAF1_DROME Probable histone-binding protein C...1860.0001     48.1     22     44GO:0033186; C:CAF-1 complex; IDA:FlyBase.::GO:0035098; C:ESC/E(Z) complex; IDA:FlyBase.::GO:0031523; C:Myb complex; IDA:FlyBase.::GO:0016581; C:NuRD complex; IDA:FlyBase.::GO:0016589; C:NURF complex; IPI:FlyBase.::GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0070822; C:Sin3-type complex; IDA:FlyBase.::GO:0005667; C:transcription factor complex; IPI:FlyBase.
GO:0035035; F:histone acetyltransferase binding; IPI:FlyBase.::GO:0042393; F:histone binding; IDA:FlyBase.::GO:0042826; F:histone deacetylase binding; IDA:FlyBase.::GO:0042803; F:protein homodimerization activity; IPI:FlyBase.
GO:0006342; P:chromatin silencing; IPI:FlyBase.::GO:0000910; P:cytokinesis; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0006281; P:DNA repair; TAS:FlyBase.::GO:0007307; P:eggshell chorion gene amplification; IC:FlyBase.::GO:0016573; P:histone acetylation; IDA:FlyBase.::GO:0070734; P:histone H3-K27 methylation; IC:GOC.::GO:0051567; P:histone H3-K9 methylation; IC:GOC.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:FlyBase.::GO:0006334; P:nucleosome assembly; IDA:FlyBase.::GO:0042766; P:nucleosome mobilization; IDA:FlyBase.::GO:0016584; P:nucleosome positioning; IDA:FlyBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:FlyBase.::GO:0007379; P:segment specification; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IDA:FlyBase.
738Q94BM7    794   SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidop...1221.3     35.4     23     46GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
739Q5ZLK1    445   DCA13_CHICK DDB1- and CUL4-associated factor ...1060.04     40     29     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
740Q92636    917   FAN_HUMAN Protein FAN OS=Homo sapiens (Human)...1530.000002     54.3     24     43GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005625; C:soluble fraction; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005057; F:receptor signaling protein activity; TAS:ProtInc.
GO:0006672; P:ceramide metabolic process; TAS:ProtInc.
741Q5AZX0    567   PFS2_EMENI Polyadenylation factor subunit 2 O...1570.062     39.7     24     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
742Q803X4    445   DCA13_DANRE DDB1- and CUL4-associated factor ...840.0008     45.4     33     52GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
743Q0DYP5    435   C3H17_ORYSJ Zinc finger CCCH domain-containin...1194.4     33.5     23     47
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
744A7TMF9    453   YTM1_VANPO Ribosome biogenesis protein YTM1 O...740.04     40     26     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
745Q5R654    426   RBBP7_PONAB Histone-binding protein RBBP7 OS=...1940.0000001     57.4     25     46GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
746Q4R4J2    461   COR1A_MACFA Coronin-1A OS=Macaca fascicularis...1040.13     38.5     27     42GO:0005938; C:cell cortex; IEA:UniProtKB-SubCell.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
747Q8VZS9    475   FZR1_ARATH Protein FIZZY-RELATED 1 OS=Arabido...600.0008     45.4     40     55GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0032877; P:positive regulation of DNA endoreduplication; IMP:TAIR.
748P54198    1017   HIRA_HUMAN Protein HIRA OS=Homo sapiens (Huma...1450.002     44.3     28     41GO:0016605; C:PML body; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
749B3LJT5    494   LIS1_YEAS1 Nuclear distribution protein PAC1 ...1530.035     40.4     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
750Q6BLS5    466   YTM1_DEBHA Ribosome biogenesis protein YTM1 O...1110.041     40     26     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
751Q5SUS0    1030   FBW10_MOUSE F-box/WD repeat-containing protei...1500.003     44.3     28     49
records
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