Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q6NVS5    445   DCA13_XENTR DDB1- and CUL4-associated factor ...830.26     37.4     28     49GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
632P0CS36    435   HAT2_CRYNJ Histone acetyltransferase type B s...1060.009     42     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
633P0CS37    435   HAT2_CRYNB Histone acetyltransferase type B s...1060.009     42     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
634Q4WEI5    436   HAT2_ASPFU Histone acetyltransferase type B s...1550.0007     45.8     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
635O43815    780   STRN_HUMAN Striatin OS=Homo sapiens (Human). ...1040.001     45.1     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; ISS:UniProtKB.::GO:0014069; C:postsynaptic density; ISS:UniProtKB.::GO:0045211; C:postsynaptic membrane; ISS:UniProtKB.::GO:0005923; C:tight junction; IDA:UniProtKB.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; ISS:UniProtKB.::GO:0030331; F:estrogen receptor binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
GO:0016358; P:dendrite development; ISS:UniProtKB.::GO:0007626; P:locomotory behavior; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0070830; P:tight junction assembly; NAS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB.
636Q54S79    942   WDR3_DICDI WD repeat-containing protein 3 hom...1020.35     37.4     22     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
637P58404    760   STRN4_MOUSE Striatin-4 OS=Mus musculus (Mouse...3350.016     41.6     23     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
638A2QPW4    412   CIAO1_ASPNC Probable cytosolic iron-sulfur pr...1320.00007     48.9     34     48
639O94967    919   WDR47_HUMAN WD repeat-containing protein 47 O...1790.00002     51.2     27     44
640Q9BRX9    315   WDR83_HUMAN WD repeat domain-containing prote...1241.5     35     28     45GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
641A8Q2R5    660   WDR48_BRUMA WD repeat-containing protein 48 h...1290.002     44.7     27     45
642Q8C7V3    528   UTP15_MOUSE U3 small nucleolar RNA-associated...1370.017     41.6     25     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
643O14186    846   YDSB_SCHPO Uncharacterized WD repeat-containi...2190.0008     45.8     24     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0005778; C:peroxisomal membrane; NAS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
644Q19124    578   A16L1_CAEEL Autophagic-related protein 16.1 O...1820.15     38.5     25     41
645Q54JS5    1023   WDR24_DICDI WD repeat-containing protein 24 h...1760.0002     48.1     24     41
646Q5SP67    576   WDR26_DANRE WD repeat-containing protein 26 O...751.3     35.4     33     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
647A1DDL6    658   MDV1_NEOFI Mitochondrial division protein 1 O...801.9     35     28     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
648Q9C1X0    297   YN55_SCHPO Uncharacterized WD repeat-containi...1540.0001     47.4     24     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
649Q9D0N7    572   CAF1B_MOUSE Chromatin assembly factor 1 subun...1250.005     43.1     25     40GO:0033186; C:CAF-1 complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
650C4R6H3    500   LIS1_PICPG Nuclear distribution protein PAC1 ...1730.0002     47.4     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
651Q9C0J8    1336   WDR33_HUMAN pre-mRNA 3' end processing protei...2900.000000001     64.7     22     41GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006301; P:postreplication repair; NAS:UniProtKB.::GO:0007283; P:spermatogenesis; NAS:UniProtKB.
652Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...3650.000000005     62.8     19     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
653Q8K4P0    1330   WDR33_MOUSE pre-mRNA 3' end processing protei...2900.000000001     64.7     22     41GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
654O94423    421   MFR1_SCHPO Meiotic fizzy-related protein 1 OS...1530.017     41.2     22     43GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0051487; P:activation of anaphase-promoting complex activity involved in meiotic cell cycle; IGI:PomBase.::GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0007138; P:meiotic anaphase II; IMP:PomBase.
655Q5SQM0    1958   EMAL6_MOUSE Echinoderm microtubule-associated...982.8     34.7     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
656O94365    494   UTP15_SCHPO U3 small nucleolar RNA-associated...1170.005     43.1     32     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005819; C:spindle; IDA:PomBase.::GO:0034455; C:t-UTP complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
657Q8CGF6    920   WDR47_MOUSE WD repeat-containing protein 47 O...1760.00005     50.1     27     44
658Q05AM5    821   ELP2_DANRE Elongator complex protein 2 OS=Dan...3950.00000002     60.8     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0061133; F:endopeptidase activator activity; ISS:UniProtKB.
GO:0043248; P:proteasome assembly; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
659Q9JHB4    367   WDR31_MOUSE WD repeat-containing protein 31 O...906.3     33.1     29     46
660Q4I7L0    423   HAT2_GIBZE Histone acetyltransferase type B s...1420.0000001     57.4     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
661A2RRU3    528   UTP15_RAT U3 small nucleolar RNA-associated p...1370.033     40.4     25     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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