Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541P25635    923   PWP2_YEAST Periodic tryptophan protein 2 OS=S...4320.0000001     58.2     21     37GO:0005737; C:cytoplasm; IDA:SGD.::GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000910; P:cytokinesis; IMP:SGD.::GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0030010; P:establishment of cell polarity; IMP:SGD.
542Q6CJ50    705   MDV1_KLULA Mitochondrial division protein 1 O...1060.00005     49.7     28     52GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
543P93563    377   GBB_SOLTU Guanine nucleotide-binding protein ...2280.000001     53.9     25     42
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
544Q20059    683   WDR48_CAEEL WD repeat-containing protein 48 h...1220.002     44.7     26     47
545Q9R099    442   TBL2_MOUSE Transducin beta-like protein 2 OS=...3061.9     34.7     19     35
546Q6GM65    799   PLAP_XENLA Phospholipase A-2-activating prote...1940.0000000003     66.6     26     47
GO:0005488; F:binding; IEA:InterPro.
547Q54S59    299   WDR61_DICDI WD repeat-containing protein 61 h...1056.2     32.7     20     44
548Q9R1K5    493   FZR_MOUSE Fizzy-related protein homolog OS=Mu...2240.006     42.7     24     41
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0070306; P:lens fiber cell differentiation; IMP:MGI.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090344; P:negative regulation of cell aging; IMP:BHF-UCL.::GO:0008284; P:positive regulation of cell proliferation; IMP:BHF-UCL.::GO:0045732; P:positive regulation of protein catabolic process; ISS:UniProtKB.::GO:0040020; P:regulation of meiosis; IDA:MGI.
549Q6PFM9    677   WDR48_DANRE WD repeat-containing protein 48 O...1030.0002     47.8     29     52GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
550Q4R2Z6    622   WDR48_MACFA WD repeat-containing protein 48 O...1030.0004     46.6     29     51GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
551P93397    377   GBB1_TOBAC Guanine nucleotide-binding protein...2260.00001     51.2     25     41
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
552Q4WVS4    658   MDV1_ASPFU Mitochondrial division protein 1 O...800.48     37     29     46GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
553O94289    713   LUB1_SCHPO Ubiquitin homeostasis protein lub1...1790.021     41.2     24     41GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0043130; F:ubiquitin binding; ISS:PomBase.
GO:0006281; P:DNA repair; ISS:PomBase.::GO:0016574; P:histone ubiquitination; NAS:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:PomBase.
554Q5F3K4    678   WDR48_CHICK WD repeat-containing protein 48 O...1030.0003     47     29     51GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
555A3LNI7    524   LIS1_PICST Nuclear distribution protein PAC1 ...1440.064     39.7     26     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
556Q5RAW8    677   WDR48_PONAB WD repeat-containing protein 48 O...1030.0004     46.6     29     51GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
557Q08706    341   GBB_LYMST Guanine nucleotide-binding protein ...760.00001     50.8     37     53
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
558A2R3Z3    657   MDV1_ASPNC Mitochondrial division protein 1 O...1520.001     45.4     24     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
559Q8TAF3    677   WDR48_HUMAN WD repeat-containing protein 48 O...1030.0004     46.6     29     51GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; IDA:UniProtKB.
560Q32PG3    677   WDR48_BOVIN WD repeat-containing protein 48 O...1030.0004     46.6     29     51GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
561Q6CKE8    434   PRP46_KLULA Pre-mRNA-splicing factor PRP46 OS...2230.00002     50.8     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
562Q6DIF4    607   WDR1_XENTR WD repeat-containing protein 1 OS=...2680.46     37     21     38GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
563B6K1G6    616   CFD1_SCHJY Probable cytosolic Fe-S cluster as...1730.004     43.5     23     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
564Q1DIW7    668   MDV1_COCIM Mitochondrial division protein 1 O...803.3     34.3     26     44GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
565Q6CMA2    333   CIAO1_KLULA Probable cytosolic iron-sulfur pr...1420.095     38.9     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
566Q6PAX7    607   WDR1B_XENLA WD repeat-containing protein 1-B ...2040.032     40.4     20     36GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
567Q6KAU8    623   A16L2_MOUSE Autophagy-related protein 16-2 OS...2150.04     40.4     23     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
568P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...2700.0000000007     64.3     27     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
569Q28D01    614   WDR26_XENTR WD repeat-containing protein 26 O...2940.036     40.4     21     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
570Q0CJD8    654   MDV1_ASPTN Mitochondrial division protein 1 O...1500.0001     48.9     26     44GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
571Q96KV7    1748   WDR90_HUMAN WD repeat-containing protein 90 O...2366.9     33.1     19     39
records
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