Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
481Q20636    356   GBB2_CAEEL Guanine nucleotide-binding protein...3420.00000000000002     78.2     24     42GO:0043025; C:neuronal cell body; IDA:WormBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007212; P:dopamine receptor signaling pathway; IMP:WormBase.::GO:0007631; P:feeding behavior; IMP:WormBase.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; IMP:WormBase.::GO:0008277; P:regulation of G-protein coupled receptor protein signaling pathway; IGI:WormBase.::GO:0040012; P:regulation of locomotion; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.::GO:0043051; P:regulation of pharyngeal pumping; IMP:WormBase.::GO:0032094; P:response to food; IMP:WormBase.
482Q39190    479   PRL2_ARATH Protein pleiotropic regulator PRL2...880.79     36.2     26     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
483Q16MY0    659   WDR48_AEDAE WD repeat-containing protein 48 h...890.00004     50.1     34     53
484O45040    340   GBB1_HOMAM Guanine nucleotide-binding protein...760.00001     50.8     37     51
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
485Q9UMS4    504   PRP19_HUMAN Pre-mRNA-processing factor 19 OS=...2800.0000000000002     75.9     21     43GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:BHF-UCL.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:BHF-UCL.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:MGI.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000209; P:protein polyubiquitination; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; IMP:BHF-UCL.
486Q54MZ3    499   CDC20_DICDI Anaphase-promoting complex subuni...3160.00001     51.2     22     35GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
487B4MFM2    667   WDR48_DROVI WD repeat-containing protein 48 h...1160.031     40.8     23     46
488Q9UTN4    509   PFS2_SCHPO Polyadenylation factor subunit 2 O...1530.0000005     55.8     25     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:2000045; P:regulation of G1/S transition of mitotic cell cycle; IMP:PomBase.
489P97499    2629   TEP1_MOUSE Telomerase protein component 1 OS=...1000.098     39.3     25     46GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IMP:UniProtKB.
490Q6CP71    452   PFS2_KLULA Polyadenylation factor subunit 2 O...3370.0000004     55.8     21     36GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
491Q4V837    710   DTLA_XENLA Denticleless protein homolog A OS=...1130.00007     49.3     31     53GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
492C5MJE8    490   LIS1_CANTT Nuclear distribution protein PAC1 ...3050.0004     46.6     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
493B4JW81    331   CIAO1_DROGR Probable cytosolic iron-sulfur pr...810.36     37     27     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
494Q6CBI8    332   CIAO1_YARLI Probable cytosolic iron-sulfur pr...1250.0002     47.4     27     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
495O35353    340   GBB4_RAT Guanine nucleotide-binding protein s...2690.000000008     60.8     25     46
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
496Q6DH44    315   WDR83_DANRE WD repeat domain-containing prote...1500.0000004     55.5     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
497Q54Y96    530   SMU1_DICDI WD40 repeat-containing protein smu...3290.0004     46.6     20     35GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
498Q6FJZ9    427   PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS...2070.005     42.7     23     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
499Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...2130.0000002     57     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
500Q6P4J8    513   SMU1_XENTR WD40 repeat-containing protein SMU...1600.0000002     57.4     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
501P26308    340   GBB1_DROME Guanine nucleotide-binding protein...2980.000000006     61.2     23     39GO:0005875; C:microtubule associated complex; IDA:FlyBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007015; P:actin filament organization; IMP:FlyBase.::GO:0045176; P:apical protein localization; TAS:FlyBase.::GO:0055059; P:asymmetric neuroblast division; IMP:FlyBase.
502Q5GIS3    341   GBB_PINFU Guanine nucleotide-binding protein ...760.00001     50.8     37     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
503A1CBP8    655   MDV1_ASPCL Mitochondrial division protein 1 O...801.1     35.8     29     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
504Q40507    375   GBB3_TOBAC Guanine nucleotide-binding protein...2260.00001     51.2     25     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
505Q42384    486   PRL1_ARATH Protein pleiotropic regulatory loc...2550.000000002     63.5     23     41GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048825; P:cotyledon development; IMP:TAIR.::GO:0009870; P:defense response signaling pathway, resistance gene-dependent; IMP:TAIR.::GO:0010204; P:defense response signaling pathway, resistance gene-independent; IMP:TAIR.::GO:0042742; P:defense response to bacterium; IMP:TAIR.::GO:0050832; P:defense response to fungus; IMP:TAIR.::GO:0009755; P:hormone-mediated signaling pathway; IMP:TAIR.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0048366; P:leaf development; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:TAIR.::GO:0006508; P:proteolysis; IMP:TAIR.::GO:0009749; P:response to glucose stimulus; IMP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0010182; P:sugar mediated signaling pathway; IMP:TAIR.
506Q9D0I6    474   WSDU1_MOUSE WD repeat, SAM and U-box domain-c...2220.0001     48.1     23     39GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
507B5X9P2    330   CIO1A_SALSA Probable cytosolic iron-sulfur pr...1130.0000008     54.7     32     50
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
508Q40687    380   GBB_ORYSJ Guanine nucleotide-binding protein ...2280.000002     53.5     25     43
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IEP:Gramene.
509A7RHG8    416   WDR12_NEMVE Ribosome biogenesis protein WDR12...2650.0004     46.2     22     35GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
510P54686    597   WD42_DICDI WD repeat-containing protein 2 hom...534     33.9     28     57GO:0060187; C:cell pole; IDA:dictyBase.::GO:0030864; C:cortical actin cytoskeleton; IDA:dictyBase.::GO:0001891; C:phagocytic cup; IDA:dictyBase.
GO:0030042; P:actin filament depolymerization; IMP:dictyBase.::GO:0008283; P:cell proliferation; IMP:dictyBase.::GO:0006935; P:chemotaxis; IMP:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.::GO:0006907; P:pinocytosis; IMP:dictyBase.
511Q9Y4P3    447   TBL2_HUMAN Transducin beta-like protein 2 OS=...3142.9     34.3     20     36
records
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