Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451P54319    795   PLAP_RAT Phospholipase A-2-activating protein...2610.0000001     58.2     25     44
452P41318    303   LST8_YEAST Target of rapamycin complex subuni...972.5     34.3     26     47GO:0010008; C:endosome membrane; IDA:SGD.::GO:0031234; C:extrinsic to internal side of plasma membrane; IDA:SGD.::GO:0000139; C:Golgi membrane; IDA:SGD.::GO:0000300; C:peripheral to membrane of membrane fraction; IDA:SGD.::GO:0031931; C:TORC1 complex; IPI:SGD.::GO:0031932; C:TORC2 complex; IPI:SGD.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030295; F:protein kinase activator activity; IMP:SGD.
GO:0030950; P:establishment or maintenance of actin cytoskeleton polarity; IMP:SGD.::GO:0031505; P:fungal-type cell wall organization; IMP:SGD.::GO:0031930; P:mitochondria-nucleus signaling pathway; IMP:SGD.::GO:0031929; P:TOR signaling cascade; IMP:SGD.::GO:0006810; P:transport; IMP:SGD.
453B4KRQ4    679   WDR48_DROMO WD repeat-containing protein 48 h...1160.029     40.8     23     46
454Q32SG6    964   HIRA_MAIZE Protein HIRA OS=Zea mays (Maize). ...960.9     36.2     25     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
455Q9NSI6    2320   BRWD1_HUMAN Bromodomain and WD repeat-contain...3610.00000000000003     79.7     23     41GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
456O43071    558   PRP17_SCHPO Pre-mRNA-processing factor 17 OS=...1490.00000009     58.2     24     45GO:0005681; C:spliceosomal complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
457B3MET8    667   WDR48_DROAN WD repeat-containing protein 48 h...1160.035     40.4     23     46
458Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...2800.0000000000003     75.9     21     43GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
459B4GDM7    335   CIAO1_DROPE Probable cytosolic iron-sulfur pr...790.025     40.4     27     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
460B4P7H8    680   WDR48_DROYA WD repeat-containing protein 48 h...1160.031     40.8     23     46
461B4J8H6    667   WDR48_DROGR WD repeat-containing protein 48 h...1160.029     40.8     23     46
462Q6BVZ3    504   PFS2_DEBHA Polyadenylation factor subunit 2 O...1211.3     35.4     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
463Q1LZ08    668   WDR48_DROME WD repeat-containing protein 48 h...1160.13     38.9     22     45
464B3NSK1    680   WDR48_DROER WD repeat-containing protein 48 h...1160.041     40.4     23     46
465Q6P1W0    713   DTL_XENTR Denticleless protein homolog OS=Xen...1440.12     38.9     29     45GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
466Q292E8    335   CIAO1_DROPS Probable cytosolic iron-sulfur pr...790.027     40.4     27     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
467Q99M63    513   SMU1_RAT WD40 repeat-containing protein SMU1 ...1600.000005     52.8     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
468Q3UKJ7    513   SMU1_MOUSE WD40 repeat-containing protein SMU...1600.000004     52.8     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
469Q2TAY7    513   SMU1_HUMAN WD40 repeat-containing protein SMU...1600.000004     52.8     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
470Q76B40    513   SMU1_CRIGR WD40 repeat-containing protein SMU...1600.000004     52.8     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
471Q2TBS9    513   SMU1_BOVIN WD40 repeat-containing protein SMU...1600.000004     52.8     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
472B0XAF3    338   CIAO1_CULQU Probable cytosolic iron-sulfur pr...3560.000000000003     71.2     25     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
473Q6NRT3    513   SMU1_XENLA WD40 repeat-containing protein SMU...1600.000005     52.8     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
474Q6CB13    565   MDV1_YARLI Mitochondrial division protein 1 O...800.091     39.3     31     44GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
475Q921C3    2304   BRWD1_MOUSE Bromodomain and WD repeat-contain...2900.0004     47.4     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0008360; P:regulation of cell shape; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
476Q7S8R5    645   MDV1_NEUCR Mitochondrial division protein 1 O...800.041     40.4     25     50GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
477A7THX0    706   MDV1_VANPO Mitochondrial division protein 1 O...1690.31     37.4     24     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
478P29387    340   GBB4_MOUSE Guanine nucleotide-binding protein...3850.00000000000001     78.6     22     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
479Q7T2F6    423   WSB1_DANRE WD repeat and SOCS box-containing ...670.1     38.9     33     55
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
480P18851    423   GBB_YEAST Guanine nucleotide-binding protein ...460.22     37.7     39     57GO:0005834; C:heterotrimeric G-protein complex; IDA:SGD.::GO:0005937; C:mating projection; IDA:SGD.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IMP:SGD.
GO:0031684; P:heterotrimeric G-protein complex cycle; IMP:SGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:SGD.::GO:0000750; P:pheromone-dependent signal transduction involved in conjugation with cellular fusion; IGI:SGD.::GO:0010525; P:regulation of transposition, RNA-mediated; IMP:SGD.
481Q20636    356   GBB2_CAEEL Guanine nucleotide-binding protein...3420.00000000000002     78.2     24     42GO:0043025; C:neuronal cell body; IDA:WormBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007212; P:dopamine receptor signaling pathway; IMP:WormBase.::GO:0007631; P:feeding behavior; IMP:WormBase.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; IMP:WormBase.::GO:0008277; P:regulation of G-protein coupled receptor protein signaling pathway; IGI:WormBase.::GO:0040012; P:regulation of locomotion; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.::GO:0043051; P:regulation of pharyngeal pumping; IMP:WormBase.::GO:0032094; P:response to food; IMP:WormBase.
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