Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421Q9AUR7    1218   COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza...2810.00003     50.4     20     38GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
422B4QFZ8    335   CIAO1_DROSI Probable cytosolic iron-sulfur pr...790.027     40.4     25     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
423Q5XGI5    314   WDR83_XENTR WD repeat domain-containing prote...1960.000003     52.8     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
424Q26544    301   WSL17_SCHMA WD repeat-containing protein SL1-...2980.00002     50.1     21     42
425Q20168    1000   COPB2_CAEEL Probable coatomer subunit beta' O...1430.000007     52.8     25     45GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048599; P:oocyte development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0032940; P:secretion by cell; IMP:WormBase.
426Q29KQ0    419   WDR12_DROPS Ribosome biogenesis protein WDR12...1210.0008     45.4     28     49GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
427P42527    1146   MHCKA_DICDI Myosin heavy chain kinase A OS=Di...3040.00000000004     69.3     24     41GO:0005938; C:cell cortex; IDA:dictyBase.
GO:0051015; F:actin filament binding; IDA:dictyBase.::GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016887; F:ATPase activity; IDA:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IDA:dictyBase.::GO:0045159; F:myosin II binding; IPI:dictyBase.
GO:0051764; P:actin crosslink formation; IDA:dictyBase.::GO:0051017; P:actin filament bundle assembly; IDA:dictyBase.::GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IDA:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.::GO:0046777; P:protein autophosphorylation; IDA:dictyBase.::GO:0051260; P:protein homooligomerization; IDA:dictyBase.
428Q12417    451   PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...2180.000007     52     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
429Q7ZVA0    513   SMU1_DANRE WD40 repeat-containing protein SMU...1600.00006     49.3     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
430Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...1870.0002     47.4     28     43GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
431Q5M7T1    339   CIAO1_RAT Probable cytosolic iron-sulfur prot...1720.0000000001     66.6     31     52GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
432O54927    421   WSB1_MOUSE WD repeat and SOCS box-containing ...670.74     36.2     30     55
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
433A4RJV3    661   MDV1_MAGO7 Mitochondrial division protein 1 O...800.078     39.3     29     46GO:0030015; C:CCR4-NOT core complex; ISS:PAMGO_MGG.::GO:0005741; C:mitochondrial outer membrane; ISS:PAMGO_MGG.
GO:0051020; F:GTPase binding; ISS:PAMGO_MGG.
GO:0000266; P:mitochondrial fission; ISS:PAMGO_MGG.::GO:0000002; P:mitochondrial genome maintenance; ISS:PAMGO_MGG.::GO:0006402; P:mRNA catabolic process; ISS:PAMGO_MGG.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PAMGO_MGG.::GO:0006354; P:transcription elongation, DNA-dependent; ISS:PAMGO_MGG.::GO:0006352; P:transcription initiation, DNA-dependent; ISS:PAMGO_MGG.
434B5DG67    423   WDR12_SALSA Ribosome biogenesis protein wdr12...1240.0002     47.4     26     50GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
435Q7K1Y4    335   CIAO1_DROME Probable cytosolic iron-sulfur pr...790.029     40.4     25     44
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
436Q9LXN4    1024   HIRA_ARATH Protein HIRA OS=Arabidopsis thalia...750.0005     46.6     33     55GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045814; P:negative regulation of gene expression, epigenetic; TAS:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
437A7ETB3    667   MDV1_SCLS1 Mitochondrial division protein 1 O...801.9     35     29     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
438A2AHJ4    1799   BRWD3_MOUSE Bromodomain and WD repeat-contain...3040.0000002     57.4     23     41
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0008360; P:regulation of cell shape; ISS:UniProtKB.
439P49178    380   GBB_MAIZE Guanine nucleotide-binding protein ...2280.0000004     55.8     26     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
440B5X212    333   CIO1B_SALSA Probable cytosolic iron-sulfur pr...824.3     33.5     29     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
441B4GT01    419   WDR12_DROPE Ribosome biogenesis protein WDR12...1640.002     44.7     26     46GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
442Q6PBD6    305   WDR61_XENTR WD repeat-containing protein 61 O...1050.041     39.7     28     52GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
443Q5ZME8    513   SMU1_CHICK WD40 repeat-containing protein SMU...1600.000006     52.4     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
444Q2H139    657   MDV1_CHAGB Mitochondrial division protein 1 O...800.029     40.8     28     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
445Q9JMJ4    504   PRP19_RAT Pre-mRNA-processing factor 19 OS=Ra...2800.0000000000008     74.3     21     43GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
446Q99KP6    504   PRP19_MOUSE Pre-mRNA-processing factor 19 OS=...2800.0000000000008     74.3     21     43GO:0005811; C:lipid particle; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0008610; P:lipid biosynthetic process; IDA:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0048711; P:positive regulation of astrocyte differentiation; IDA:MGI.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.
447Q0U2T3    681   MDV1_PHANO Mitochondrial division protein 1 O...803.6     33.9     29     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
448P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...2980.000000005     61.6     22     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
449Q6RI45    1802   BRWD3_HUMAN Bromodomain and WD repeat-contain...3040.000002     54.7     23     40
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.
450O76071    339   CIAO1_HUMAN Probable cytosolic iron-sulfur pr...1720.0000000001     66.6     31     52GO:0071817; C:MMXD complex; IDA:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; IGI:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.
451P54319    795   PLAP_RAT Phospholipase A-2-activating protein...2610.0000001     58.2     25     44
records
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