Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
391P74598    348   Y1491_SYNY3 Uncharacterized WD repeat-contain...1070.00003     49.7     28     49GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
392B4KKN1    419   WDR12_DROMO Ribosome biogenesis protein WDR12...1180.0005     46.2     30     49GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
393P36408    347   GBB_DICDI Guanine nucleotide-binding protein ...2800.000000000002     72.4     21     43GO:0005834; C:heterotrimeric G-protein complex; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0031682; F:G-protein gamma-subunit binding; IDA:dictyBase.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007190; P:activation of adenylate cyclase activity; TAS:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0043326; P:chemotaxis to folate; IMP:dictyBase.::GO:0007188; P:G-protein signaling, coupled to cAMP nucleotide second messenger; IDA:dictyBase.::GO:0032320; P:positive regulation of Ras GTPase activity; IMP:dictyBase.::GO:0030826; P:regulation of cGMP biosynthetic process; TAS:dictyBase.
394B0X2V9    670   WDR48_CULQU WD repeat-containing protein 48 h...890.000005     52.8     35     54
395Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...2810.00002     50.8     20     38GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
396P54311    340   GBB1_RAT Guanine nucleotide-binding protein G...2980.00000001     60.5     23     39GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0010659; P:cardiac muscle cell apoptotic process; IDA:MGI.::GO:0071456; P:cellular response to hypoxia; IDA:MGI.::GO:0007204; P:elevation of cytosolic calcium ion concentration; IMP:RGD.
397P62874    340   GBB1_MOUSE Guanine nucleotide-binding protein...2980.00000001     60.5     23     39GO:0005834; C:heterotrimeric G-protein complex; IPI:MGI.::GO:0001750; C:photoreceptor outer segment; IDA:MGI.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007200; P:activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger; IDA:MGI.::GO:0008283; P:cell proliferation; IDA:MGI.::GO:0060041; P:retina development in camera-type eye; IMP:MGI.::GO:0050909; P:sensory perception of taste; IDA:MGI.
398P62873    340   GBB1_HUMAN Guanine nucleotide-binding protein...2980.00000001     60.5     23     39GO:0005834; C:heterotrimeric G-protein complex; IDA:MGI.::GO:0005624; C:membrane fraction; ISS:BHF-UCL.
GO:0003924; F:GTPase activity; IDA:MGI.::GO:0051020; F:GTPase binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; ISS:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; ISS:BHF-UCL.::GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0071380; P:cellular response to prostaglandin E stimulus; ISS:BHF-UCL.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; TAS:ProtInc.::GO:0030168; P:platelet activation; TAS:Reactome.::GO:0007265; P:Ras protein signal transduction; TAS:ProtInc.::GO:0007268; P:synaptic transmission; TAS:Reactome.
399P62872    340   GBB1_CANFA Guanine nucleotide-binding protein...2980.00000001     60.5     23     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
400P62871    340   GBB1_BOVIN Guanine nucleotide-binding protein...2980.00000001     60.5     23     39GO:0005834; C:heterotrimeric G-protein complex; IDA:BHF-UCL.::GO:0005624; C:membrane fraction; IDA:BHF-UCL.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; IDA:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; IDA:BHF-UCL.::GO:0071380; P:cellular response to prostaglandin E stimulus; IDA:BHF-UCL.
401Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...830.78     35.8     25     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
402Q39336    327   GBLP_BRANA Guanine nucleotide-binding protein...2190.000000000007     70.1     30     46
403Q9Y263    795   PLAP_HUMAN Phospholipase A-2-activating prote...2610.00000007     58.9     25     44
GO:0016005; F:phospholipase A2 activator activity; TAS:ProtInc.
GO:0006644; P:phospholipid metabolic process; TAS:ProtInc.::GO:0007165; P:signal transduction; TAS:ProtInc.
404Q5R5W8    340   GBB1_PONAB Guanine nucleotide-binding protein...2980.000000003     62.4     24     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
405P49177    377   GBB_ARATH Guanine nucleotide-binding protein ...760.26     37.4     29     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005783; C:endoplasmic reticulum; IDA:TAIR.::GO:0005834; C:heterotrimeric G-protein complex; IPI:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009817; P:defense response to fungus, incompatible interaction; IMP:TAIR.::GO:0030968; P:endoplasmic reticulum unfolded protein response; IMP:TAIR.::GO:0010154; P:fruit development; IMP:TAIR.::GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:TAIR.::GO:0048527; P:lateral root development; IMP:TAIR.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0009887; P:organ morphogenesis; IMP:TAIR.::GO:0072593; P:reactive oxygen species metabolic process; IMP:TAIR.::GO:0009723; P:response to ethylene stimulus; IMP:TAIR.::GO:0009845; P:seed germination; IEP:UniProtKB.
406B4MY77    335   CIAO1_DROWI Probable cytosolic iron-sulfur pr...790.057     39.3     25     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
407B4HND9    680   WDR48_DROSE WD repeat-containing protein 48 h...1160.042     40.4     22     46
408B4QB64    668   WDR48_DROSI WD repeat-containing protein 48 h...1160.044     40     22     46
409Q6GMD2    305   WDR61_XENLA WD repeat-containing protein 61 O...830.041     39.7     31     52GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
410Q6FLI3    579   CAF4_CANGA CCR4-associated factor 4 homolog O...1410.026     40.8     22     40GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
411B4HRQ6    335   CIAO1_DROSE Probable cytosolic iron-sulfur pr...810.052     39.7     26     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
412Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...670.27     37.4     30     55GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
413Q28YY2    680   WDR48_DROPS WD repeat-containing protein 48 h...1160.033     40.4     23     46
414B4GIJ0    680   WDR48_DROPE WD repeat-containing protein 48 h...1160.033     40.4     23     46
415Q9AUR8    1218   COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza...2810.00002     51.6     20     38GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
416B4KTK4    331   CIAO1_DROMO Probable cytosolic iron-sulfur pr...810.15     38.1     27     46
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
417Q99KN2    339   CIAO1_MOUSE Probable cytosolic iron-sulfur pr...1720.0000000001     66.6     31     52GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:MGI.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:MGI.
418A8QB65    433   WDR12_BRUMA Ribosome biogenesis protein WDR12...2200.004     43.1     23     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
419Q9P7I3    651   MDV1_SCHPO Mitochondrial division protein 1 O...2470.043     40     21     36GO:0030015; C:CCR4-NOT core complex; NAS:PomBase.::GO:0005741; C:mitochondrial outer membrane; ISS:PomBase.
GO:0051020; F:GTPase binding; NAS:PomBase.
GO:0000266; P:mitochondrial fission; ISS:PomBase.::GO:0000002; P:mitochondrial genome maintenance; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PomBase.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
420Q32PJ6    339   CIAO1_BOVIN Probable cytosolic iron-sulfur pr...2780.0000000003     65.1     24     43GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
421Q9AUR7    1218   COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza...2810.00003     50.4     20     38GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
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