UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YCR072C

Length:

515

Number of sequences:

5887

Description:

YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
361	Q99973	2627	TEP1_HUMAN Telomerase protein component 1 OS=...	265	0.019	41.6	18	38	GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:MGI.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005625; C:soluble fraction; ISS:UniProtKB.::GO:0005697; C:telomerase holoenzyme complex; IDA:UniProtKB.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; ISS:UniProtKB.
									GO:0000722; P:telomere maintenance via recombination; IDA:UniProtKB.
362	P49027	334	GBLPA_ORYSJ Guanine nucleotide-binding protei...	175	0.0000001	57	29	47	GO:0005886; C:plasma membrane; IDA:UniProtKB.
									GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
									GO:0050832; P:defense response to fungus; IMP:UniProtKB.::GO:0060267; P:positive regulation of respiratory burst; IMP:UniProtKB.
363	O94620	340	CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS...	169	0.000000005	61.6	25	45	GO:0005681; C:spliceosomal complex; IDA:PomBase.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase.
364	P56094	682	TUP1_KLULA General transcriptional corepresso...	182	0.0001	48.1	24	43
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
365	B4P7Q3	335	CIAO1_DROYA Probable cytosolic iron-sulfur pr...	79	0.019	40.8	25	44
									GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
366	Q55FR9	1221	COPA_DICDI Coatomer subunit alpha OS=Dictyost...	109	0.00008	49.3	28	49	GO:0030126; C:COPI vesicle coat; IEA:InterPro.
									GO:0005198; F:structural molecule activity; IEA:InterPro.
									GO:0006886; P:intracellular protein transport; IEA:InterPro.
367	Q94A40	1216	COPA1_ARATH Coatomer subunit alpha-1 OS=Arabi...	112	0.0004	47	29	49	GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.
									GO:0005198; F:structural molecule activity; IEA:InterPro.
									GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
368	Q8IZU2	1322	WDR17_HUMAN WD repeat-containing protein 17 O...	529	0.00009	49.3	20	35
369	Q9VKQ3	420	WDR12_DROME Ribosome biogenesis protein WDR12...	128	0.000005	52.8	30	52	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
									GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
370	Q9HAV0	340	GBB4_HUMAN Guanine nucleotide-binding protein...	269	0.0000000000008	73.2	26	46	GO:0005886; C:plasma membrane; TAS:Reactome.
									GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
									GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.
371	B3NQR5	335	CIAO1_DROER Probable cytosolic iron-sulfur pr...	152	1.2	35.4	28	41
									GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
372	Q5VQ78	907	COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...	304	0.000002	54.3	20	39	GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
									GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
									GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
373	Q10282	305	GBB_SCHPO Guanine nucleotide-binding protein ...	150	2.5	34.3	21	36	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005834; C:heterotrimeric G-protein complex; TAS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
									GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
									GO:0010619; P:activation of adenylate cyclase activity by glucose-triggered G-protein signaling pathway; TAS:PomBase.::GO:0031138; P:negative regulation of conjugation with cellular fusion; TAS:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
374	B4P116	420	WDR12_DROYA Ribosome biogenesis protein WDR12...	128	0.000001	54.3	31	52	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
									GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
375	Q01369	316	GBLP_NEUCR Guanine nucleotide-binding protein...	357	0.000000000003	70.9	22	43
376	Q8H0T9	837	KTNB1_ARATH Katanin p80 WD40 repeat-containin...	102	0.0006	46.2	25	42	GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
									GO:0005515; F:protein binding; IPI:TAIR.
377	Q5RAC9	607	A16L1_PONAB Autophagy-related protein 16-1 OS...	147	0.007	42.7	24	44	GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
									GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
378	P38011	319	GBLP_YEAST Guanine nucleotide-binding protein...	123	0.00000001	60.5	33	50	GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
									GO:0001965; F:G-protein alpha-subunit binding; IPI:SGD.::GO:0005092; F:GDP-dissociation inhibitor activity; IDA:SGD.::GO:0004871; F:signal transducer activity; IMP:SGD.
									GO:0007186; P:G-protein coupled receptor signaling pathway; IMP:SGD.::GO:0010255; P:glucose mediated signaling pathway; IMP:SGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:SGD.::GO:0017148; P:negative regulation of translation; IMP:SGD.
379	A5DJX5	507	LIS1_PICGU Nuclear distribution protein PAC1 ...	480	4e-16	84.7	25	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
380	Q25189	317	GBLP_HYDVU Guanine nucleotide-binding protein...	355	0.000000000000006	79.3	25	41
381	B4HWV6	420	WDR12_DROSE Ribosome biogenesis protein WDR12...	128	0.000003	53.1	30	52	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
									GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
382	Q6ZMY6	472	WDR88_HUMAN WD repeat-containing protein 88 O...	76	0.0002	47.4	36	55
383	A8IZG4	352	CIAO1_CHLRE Probable cytosolic iron-sulfur pr...	34	5.3	33.1	44	56
384	P87060	775	POP1_SCHPO WD repeat-containing protein pop1 ...	153	0.000000002	64.3	27	48	GO:0005634; C:nucleus; IDA:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
									GO:0030674; F:protein binding, bridging; IPI:PomBase.
									GO:0006995; P:cellular response to nitrogen starvation; IGI:PomBase.::GO:0000747; P:conjugation with cellular fusion; IMP:PomBase.::GO:0008054; P:cyclin catabolic process; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.
385	B4Q9T6	420	WDR12_DROSI Ribosome biogenesis protein WDR12...	128	0.000008	52	30	52	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
									GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
386	B0W517	425	WDR12_CULQU Ribosome biogenesis protein WDR12...	229	0.0000001	57.4	23	36	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
									GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
387	Q6TMK6	340	GBB1_CRIGR Guanine nucleotide-binding protein...	340	0.000000000000002	81.3	22	41
									GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
388	P83774	317	GBLP_CANAL Guanine nucleotide-binding protein...	180	0.0004	46.2	23	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:CGD.
									GO:0007155; P:cell adhesion; IMP:CGD.::GO:0030448; P:hyphal growth; IMP:CGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.
389	P53622	1201	COPA_YEAST Coatomer subunit alpha OS=Saccharo...	222	0.0000003	57.4	21	39	GO:0030126; C:COPI vesicle coat; IMP:SGD.
									GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
									GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
390	Q55DA2	333	CIAO1_DICDI Probable cytosolic iron-sulfur pr...	132	0.001	44.7	28	45
									GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
391	P74598	348	Y1491_SYNY3 Uncharacterized WD repeat-contain...	107	0.00003	49.7	28	49	GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.

records

Previous

‹‹

››

Next

Total records:

1000

361 - 390