Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331Q922V4    513   PLRG1_MOUSE Pleiotropic regulator 1 OS=Mus mu...2200.0000001     57.8     25     40GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
332Q2KID6    513   PLRG1_BOVIN Pleiotropic regulator 1 OS=Bos ta...2370.0000001     57.8     24     39GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
333O43660    514   PLRG1_HUMAN Pleiotropic regulator 1 OS=Homo s...2370.0000001     58.2     24     39GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
334Q9WUC8    514   PLRG1_RAT Pleiotropic regulator 1 OS=Rattus n...2200.0000002     57.4     25     40GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
335Q5DFU0    352   CIAO1_SCHJA Probable cytosolic iron-sulfur pr...1680.31     37     24     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
336Q5FVN8    476   WSDU1_RAT WD repeat, SAM and U-box domain-con...2530.00001     51.6     24     38GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
337Q75BY3    425   PRP46_ASHGO Pre-mRNA-splicing factor PRP46 OS...2610.00000001     60.8     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
338P49026    326   GBLP_TOBAC Guanine nucleotide-binding protein...1860.00000006     58.2     28     42
339B3MJV8    419   WDR12_DROAN Ribosome biogenesis protein WDR12...1210.0003     47     27     50GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
340Q9C827    926   COB22_ARATH Coatomer subunit beta'-2 OS=Arabi...2760.0000000001     67.8     22     47GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
341Q758R7    715   MDV1_ASHGO Mitochondrial division protein 1 O...1250.004     43.9     25     46GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
342Q6NLV4    647   FY_ARATH Flowering time control protein FY OS...3790.00000000000006     78.2     25     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IGI:TAIR.::GO:0009909; P:regulation of flower development; IMP:TAIR.
343B4LJT7    331   CIAO1_DROVI Probable cytosolic iron-sulfur pr...1520.21     37.7     26     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
344Q9I9H8    1261   APAF_DANRE Apoptotic protease-activating fact...1340.01     42.4     28     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006952; P:defense response; IEA:InterPro.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
345Q9SJT9    1218   COPA2_ARATH Coatomer subunit alpha-2 OS=Arabi...1120.001     45.8     29     49GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
346Q6C709    441   PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS...990.00005     49.3     30     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
347Q10281    314   GBLP_SCHPO Guanine nucleotide-binding protein...3462e-16     83.6     25     38GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005080; F:protein kinase C binding; IPI:PomBase.::GO:0043022; F:ribosome binding; IDA:PomBase.
GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0035556; P:intracellular signal transduction; IMP:PomBase.::GO:2000766; P:negative regulation of cytoplasmic translation; ISS:PomBase.::GO:0031139; P:positive regulation of conjugation with cellular fusion; IMP:PomBase.::GO:0032956; P:regulation of actin cytoskeleton organization; IGI:PomBase.::GO:0032995; P:regulation of fungal-type cell wall biogenesis; IGI:PomBase.
348P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...1730.64     36.2     21     41GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
349O74184    314   WAT1_SCHPO WD repeat-containing protein wat1 ...3160.00000000000007     75.9     24     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.::GO:0031932; C:TORC2 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006397; P:mRNA processing; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
350Q8L828    909   COB23_ARATH Coatomer subunit beta'-3 OS=Arabi...550.000003     53.9     42     69GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
351B3N534    420   WDR12_DROER Ribosome biogenesis protein WDR12...1280.000004     52.8     30     52GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
352O24456    327   GBLPA_ARATH Guanine nucleotide-binding protei...1870.0000003     56.2     29     46GO:0009507; C:chloroplast; IDA:TAIR.::GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0006417; P:regulation of translation; IGI:TAIR.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0042254; P:ribosome biogenesis; IGI:TAIR.::GO:0009845; P:seed germination; IGI:TAIR.
353Q54R82    942   MKKA_DICDI Mitogen-activated protein kinase k...1800.0000000003     66.6     26     51GO:0005938; C:cell cortex; IDA:dictyBase.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004709; F:MAP kinase kinase kinase activity; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0030587; P:sorocarp development; IMP:dictyBase.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
354P54313    340   GBB2_RAT Guanine nucleotide-binding protein G...760.000005     52.4     36     53GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.::GO:0043234; C:protein complex; IDA:RGD.
GO:0005246; F:calcium channel regulator activity; IMP:RGD.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
355P62880    340   GBB2_MOUSE Guanine nucleotide-binding protein...760.000005     52.4     36     53GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
356P62879    340   GBB2_HUMAN Guanine nucleotide-binding protein...760.000005     52.4     36     53GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0003924; F:GTPase activity; TAS:ProtInc.::GO:0051020; F:GTPase binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:ProtInc.::GO:0007268; P:synaptic transmission; TAS:Reactome.
357P11017    340   GBB2_BOVIN Guanine nucleotide-binding protein...760.000005     52.4     36     53GO:0005834; C:heterotrimeric G-protein complex; IDA:MGI.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0003924; F:GTPase activity; IDA:MGI.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
358Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...2130.0002     48.1     21     38GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
359Q54WA3    316   PEX7_DICDI Peroxisomal targeting signal 2 rec...1070.000005     52     25     54GO:0005777; C:peroxisome; ISS:dictyBase.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; ISS:dictyBase.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
360B3RQN1    432   WDR12_TRIAD Ribosome biogenesis protein WDR12...1050.0002     47.4     27     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
361Q99973    2627   TEP1_HUMAN Telomerase protein component 1 OS=...2650.019     41.6     18     38GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:MGI.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005625; C:soluble fraction; ISS:UniProtKB.::GO:0005697; C:telomerase holoenzyme complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000722; P:telomere maintenance via recombination; IDA:UniProtKB.
records
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