Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR066W
Length:
487
Number of sequences:
5887
Description:
YCR066W RAD18 SGDID:S000000662, Chr III from 231500-232963, Genome Release 64-1-1, Verified ORF, "E3 ubiqutin ligase, forms heterodimer with Rad6p to monoubiquitinate PCNA-K164; heterodimer binds single-stranded DNA and has single-stranded DNA dependent ATPase activity; required for postreplication repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
571Q22122    322   ZC21A_CAEEL Zinc finger C2HC domain-containin...385     33.1     45     55
572A1L020    520   MEX3A_HUMAN RNA-binding protein MEX3A OS=Homo...405.2     33.5     38     48GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
573Q618K0    322   ZC21A_CAEBR Zinc finger C2HC domain-containin...385.4     33.1     42     58
574Q1MTQ0    692   BRL1_SCHPO E3 ubiquitin-protein ligase brl1 O...445.4     33.5     34     57GO:0005721; C:centromeric heterochromatin; IDA:PomBase.::GO:0033503; C:HULC complex; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006342; P:chromatin silencing; IMP:PomBase.::GO:0006336; P:DNA replication-independent nucleosome assembly; TAS:PomBase.::GO:0071894; P:histone H2B conserved C-terminal lysine ubiquitination; IDA:PomBase.::GO:0051569; P:regulation of histone H3-K4 methylation; IMP:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEP:PomBase.
575Q8RXD3    310   AIP2_ARATH E3 ubiquitin-protein ligase AIP2 O...725.4     33.1     29     44GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.
576Q8IWZ4    208   TRI48_HUMAN Tripartite motif-containing prote...475.5     32.7     32     51GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
577Q9M2S6    273   SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1...455.7     32.7     36     49GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-KW.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005792; C:microsome; IDA:TAIR.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009789; P:positive regulation of abscisic acid mediated signaling pathway; IMP:TAIR.::GO:0009737; P:response to abscisic acid stimulus; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0009414; P:response to water deprivation; IEP:TAIR.
578Q96PX1    679   RN157_HUMAN RING finger protein 157 OS=Homo s...525.8     33.1     31     44
GO:0008270; F:zinc ion binding; IEA:InterPro.
579Q9BRZ2    755   TRI56_HUMAN E3 ubiquitin-protein ligase TRIM5...545.8     33.1     35     48GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051607; P:defense response to virus; ISS:UniProtKB.::GO:0032608; P:interferon-beta production; ISS:UniProtKB.::GO:0070534; P:protein K63-linked ubiquitination; ISS:UniProtKB.::GO:0034340; P:response to type I interferon; ISS:UniProtKB.
580Q9M2P4    308   SINA2_ARATH E3 ubiquitin-protein ligase SINAT...465.8     32.7     39     50GO:0005634; C:nucleus; IEA:InterPro.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:InterPro.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
581Q3TEL6    685   RN157_MOUSE RING finger protein 157 OS=Mus mu...526.3     33.1     31     44
GO:0008270; F:zinc ion binding; IEA:InterPro.
582P90859    564   HRDL1_CAEEL E3 ubiquitin-protein ligase hrd-l...396.5     33.1     33     44GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0043526; P:neuroprotection; IMP:UniProtKB.
583Q803I8    625   SYVN1_DANRE E3 ubiquitin-protein ligase synov...506.6     33.1     34     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
584Q1PSW8    855   LIN41_MOUSE Tripartite motif-containing prote...816.6     33.1     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0071310; P:cellular response to organic substance; IDA:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.
585Q9VE61    147   RN181_DROME E3 ubiquitin-protein ligase RNF18...486.7     32     38     48
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
586Q9QUS6    705   TRIM1_MOUSE Probable E3 ubiquitin-protein lig...307     33.1     40     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
587Q9BSJ1    452   SPRY5_HUMAN SPRY domain-containing protein 5 ...347.3     32.7     44     59GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
588Q8LF65    235   ATL17_ARATH RING-H2 finger protein ATL17 OS=A...597.5     32.3     31     51GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:UniProtKB-KW.::GO:0010200; P:response to chitin; IEP:TAIR.
589Q8N8N0    203   RN152_HUMAN E3 ubiquitin-protein ligase RNF15...487.6     32     38     56GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; TAS:UniProtKB.::GO:0070936; P:protein K48-linked ubiquitination; IDA:UniProtKB.
590D2H6Z0    203   RN152_AILME E3 ubiquitin-protein ligase RNF15...488.2     32     38     56GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB.
591Q9V8P9    1038   TOPRS_DROME E3 ubiquitin-protein ligase Topor...968.2     32.7     28     40GO:0005652; C:nuclear lamina; IDA:UniProtKB.::GO:0005700; C:polytene chromosome; IDA:UniProtKB.
GO:0005521; F:lamin binding; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0006997; P:nucleus organization; IMP:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IGI:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
592A6NDI0    452   TR49B_HUMAN Putative tripartite motif-contain...358.3     32.7     37     51GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
593Q20548    822   RN207_CAEEL Probable RING finger protein 207 ...408.5     32.7     38     50GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
594Q9FIR0    289   ATL30_ARATH RING-H2 finger protein ATL30 OS=A...688.5     32.3     29     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
595Q28E95    861   SH3R1_XENTR E3 ubiquitin-protein ligase SH3RF...658.5     32.7     32     48GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030027; C:lamellipodium; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
596Q9SJJ7    237   ATL57_ARATH RING-H2 finger protein ATL57 OS=A...428.6     32     43     55GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
597Q9UJV3    735   TRIM1_HUMAN Probable E3 ubiquitin-protein lig...308.8     32.7     40     60GO:0005813; C:centrosome; IDA:HPA.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
598D4A723    203   RN152_RAT E3 ubiquitin-protein ligase RNF152 ...489     32     38     56GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB.
599Q9C6H3    313   SINL2_ARATH E3 ubiquitin-protein ligase SINA-...599.3     32.3     37     51GO:0005634; C:nucleus; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:InterPro.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
600Q1L8G6    1060   AKIB1_DANRE Ankyrin repeat and IBR domain-con...569.3     32.7     39     43
GO:0008270; F:zinc ion binding; IEA:InterPro.
601E1C2W7    203   RN152_CHICK E3 ubiquitin-protein ligase RNF15...489.3     32     38     56GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB.
records
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