Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR066W
Length:
487
Number of sequences:
5887
Description:
YCR066W RAD18 SGDID:S000000662, Chr III from 231500-232963, Genome Release 64-1-1, Verified ORF, "E3 ubiqutin ligase, forms heterodimer with Rad6p to monoubiquitinate PCNA-K164; heterodimer binds single-stranded DNA and has single-stranded DNA dependent ATPase activity; required for postreplication repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331Q9H2S5    420   RNF39_HUMAN RING finger protein 39 OS=Homo sa...850.18     37.7     26     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; NAS:UniProtKB.
332Q5D7I0    494   TRIM5_SAISC Tripartite motif-containing prote...640.18     38.1     30     48GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
333Q5TM52    420   RNF39_MACMU RING finger protein 39 OS=Macaca ...850.18     37.7     26     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
334Q3UF64    445   RNFT2_MOUSE RING finger and transmembrane dom...380.18     37.7     37     55GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
335Q1ACD7    494   TRIM5_NOMLE Tripartite motif-containing prote...720.18     38.1     26     49GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
336Q96BQ3    446   TRI43_HUMAN Tripartite motif-containing prote...430.18     37.7     44     53GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
337Q7YR31    420   RNF39_PANTR RING finger protein 39 OS=Pan tro...850.19     37.7     26     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
338Q6J1I7    237   RN166_RAT RING finger protein 166 OS=Rattus n...500.19     37.4     40     50GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
339Q3U9F6    237   RN166_MOUSE RING finger protein 166 OS=Mus mu...500.19     37.4     40     50GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
340Q9FNG6    378   C3H51_ARATH Zinc finger CCCH domain-containin...400.19     37.7     35     45GO:0016020; C:membrane; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
341Q0IJ20    695   RN145_XENTR RING finger protein 145 OS=Xenopu...380.19     38.1     42     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
342A5WW08    637   CHFR_DANRE E3 ubiquitin-protein ligase CHFR O...680.19     38.1     26     50GO:0016605; C:PML body; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007093; P:mitotic cell cycle checkpoint; ISS:UniProtKB.::GO:0019941; P:modification-dependent protein catabolic process; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.
343Q1ACD6    494   TRIM5_HYLSY Tripartite motif-containing prote...720.19     37.7     26     49GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
344P25172    1368   SUZ2_DROME Protein suppressor 2 of zeste OS=D...460.19     38.1     35     48GO:0005725; C:intercalary heterochromatin; NAS:FlyBase.::GO:0035102; C:PRC1 complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IDA:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006342; P:chromatin silencing; IDA:FlyBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
345Q5BIY5    695   RN145_XENLA RING finger protein 145 OS=Xenopu...380.2     38.1     42     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
346Q5D7I1    547   TRIM5_ATEGE Tripartite motif-containing prote...540.2     37.7     35     48GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
347Q8BFW4    522   TRI65_MOUSE Tripartite motif-containing prote...490.2     37.7     37     53
GO:0008270; F:zinc ion binding; IEA:InterPro.
348Q96EP1    664   CHFR_HUMAN E3 ubiquitin-protein ligase CHFR O...460.2     38.1     39     52GO:0016605; C:PML body; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007093; P:mitotic cell cycle checkpoint; IMP:UniProtKB.::GO:0019941; P:modification-dependent protein catabolic process; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.
349Q6CB23    256   CWC24_YARLI Pre-mRNA-splicing factor CWC24 OS...380.2     37.4     39     50GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
350Q9BSM1    259   PCGF1_HUMAN Polycomb group RING finger protei...520.2     37.4     33     50GO:0031519; C:PcG protein complex; IDA:UniProtKB.
GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0035518; P:histone H2A monoubiquitination; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
351Q2YDF9    259   PCGF1_BOVIN Polycomb group RING finger protei...520.21     37.4     33     50GO:0031519; C:PcG protein complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
352A2VDP1    975   BRE1A_BOVIN E3 ubiquitin-protein ligase BRE1A...410.21     38.1     41     49GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0002039; F:p53 binding; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.::GO:0031625; F:ubiquitin protein ligase binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033523; P:histone H2B ubiquitination; ISS:UniProtKB.::GO:0010390; P:histone monoubiquitination; ISS:UniProtKB.::GO:0030336; P:negative regulation of cell migration; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
353Q5C8U4    515   TRIM5_CERPY Tripartite motif-containing prote...750.21     37.7     24     47GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
354Q11096    347   YWZ6_CAEEL Uncharacterized RING finger protei...480.21     37.7     35     52
GO:0008270; F:zinc ion binding; IEA:InterPro.
355Q1XH17    477   TRI72_MOUSE Tripartite motif-containing prote...710.21     37.7     25     41GO:0030659; C:cytoplasmic vesicle membrane; IDA:UniProtKB.::GO:0042383; C:sarcolemma; IDA:UniProtKB.
GO:0001786; F:phosphatidylserine binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006887; P:exocytosis; TAS:UniProtKB.::GO:0006900; P:membrane budding; TAS:UniProtKB.::GO:0007517; P:muscle organ development; IMP:UniProtKB.::GO:0003012; P:muscle system process; IMP:UniProtKB.::GO:0001778; P:plasma membrane repair; IMP:UniProtKB.::GO:0051260; P:protein homooligomerization; IPI:UniProtKB.
356Q8R023    259   PCGF1_MOUSE Polycomb group RING finger protei...520.21     37.4     33     50GO:0031519; C:PcG protein complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
357Q9FVS2    660   ORTH3_ARATH E3 ubiquitin-protein ligase ORTHR...310.21     37.7     39     55GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0008327; F:methyl-CpG binding; ISS:UniProtKB.::GO:0010428; F:methyl-CpNpG binding; ISS:UniProtKB.::GO:0010429; F:methyl-CpNpN binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0010424; P:DNA methylation on cytosine within a CG sequence; ISS:UniProtKB.
358Q5VTR2    975   BRE1A_HUMAN E3 ubiquitin-protein ligase BRE1A...410.22     38.1     41     49GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; IDA:UniProtKB.
GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0002039; F:p53 binding; IDA:UniProtKB.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.::GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033523; P:histone H2B ubiquitination; IDA:UniProtKB.::GO:0010390; P:histone monoubiquitination; IDA:UniProtKB.::GO:0030336; P:negative regulation of cell migration; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:UniProtKB.
359Q5D7H8    494   TRIM5_CALDO Tripartite motif-containing prote...640.22     37.7     31     47GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
360Q8CBG9    286   RN170_MOUSE RING finger protein 170 OS=Mus mu...540.22     37.4     35     44GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
361O80927    235   ATL33_ARATH RING-H2 finger protein ATL33 OS=A...260.23     37     54     65GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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