Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR066W
Length:
487
Number of sequences:
5887
Description:
YCR066W RAD18 SGDID:S000000662, Chr III from 231500-232963, Genome Release 64-1-1, Verified ORF, "E3 ubiqutin ligase, forms heterodimer with Rad6p to monoubiquitinate PCNA-K164; heterodimer binds single-stranded DNA and has single-stranded DNA dependent ATPase activity; required for postreplication repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
301Q6LFN2    1103   ZNRF1_PLAF7 RING finger protein PFF0165c OS=P...550.12     38.9     31     51
GO:0008270; F:zinc ion binding; IEA:InterPro.
302Q5D7J0    495   TRIM5_COLGU Tripartite motif-containing prote...730.12     38.5     26     47GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
303Q757D9    643   BRE1_ASHGO E3 ubiquitin-protein ligase BRE1 O...480.12     38.5     33     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
304Q8BH75    317   RNF41_MOUSE E3 ubiquitin-protein ligase NRDP1...440.13     38.1     41     52
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0031386; F:protein tag; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006917; P:induction of apoptosis; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.
305Q7T3E6    324   BMI1B_DANRE Polycomb complex protein BMI-1-B ...540.13     38.1     33     52GO:0031519; C:PcG protein complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
306Q6K4V3    326   C3H15_ORYSJ Zinc finger CCCH domain-containin...380.13     38.1     37     53
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
307P79051    861   RHP16_SCHPO ATP-dependent helicase rhp16 OS=S...450.13     38.5     33     49GO:0000109; C:nucleotide-excision repair complex; IPI:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0034644; P:cellular response to UV; IGI:PomBase.::GO:0006289; P:nucleotide-excision repair; IGI:PomBase.
308Q5FWL3    317   RNF41_XENLA E3 ubiquitin-protein ligase NRDP1...440.13     38.1     41     52
GO:0031386; F:protein tag; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006917; P:induction of apoptosis; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.
309Q8IUD6    432   RN135_HUMAN E3 ubiquitin-protein ligase RNF13...440.13     38.5     36     45GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043021; F:ribonucleoprotein complex binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045087; P:innate immune response; TAS:Reactome.::GO:0032480; P:negative regulation of type I interferon production; TAS:Reactome.::GO:0032728; P:positive regulation of interferon-beta production; IMP:UniProtKB.::GO:0045088; P:regulation of innate immune response; IMP:UniProtKB.
310Q5R7T5    317   RNF41_PONAB E3 ubiquitin-protein ligase NRDP1...440.13     38.1     41     52
GO:0031386; F:protein tag; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006917; P:induction of apoptosis; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.
311Q9H4P4    317   RNF41_HUMAN E3 ubiquitin-protein ligase NRDP1...440.13     38.1     41     52GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0031386; F:protein tag; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006917; P:induction of apoptosis; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:2000377; P:regulation of reactive oxygen species metabolic process; IMP:UniProtKB.
312Q8C7M3    817   TRIM9_MOUSE E3 ubiquitin-protein ligase TRIM9...400.14     38.5     33     53GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IDA:UniProtKB.::GO:0008021; C:synaptic vesicle; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
313Q9FNI6    1029   SM3L2_ARATH Putative SWI/SNF-related matrix-a...400.14     38.5     40     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0000724; P:double-strand break repair via homologous recombination; IMP:TAIR.
314Q96EX2    444   RNFT2_HUMAN RING finger and transmembrane dom...380.14     38.1     37     55GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
315Q5D7I6    551   TRIM5_ALOSA Tripartite motif-containing prote...500.15     38.5     36     52GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
316Q9LZV8    159   ATL74_ARATH RING-H2 finger protein ATL74 OS=A...590.15     37     39     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
317P22470    610   SAN1_YEAST Protein SAN1 OS=Saccharomyces cere...690.15     38.5     33     43GO:0005737; C:cytoplasm; IMP:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0071630; P:nucleus-associated proteasomal ubiquitin-dependent protein catabolic process; IMP:SGD.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.
318Q91ZY8    710   TRIM9_RAT E3 ubiquitin-protein ligase TRIM9 O...350.15     38.5     37     51GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IDA:RGD.::GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0008021; C:synaptic vesicle; IDA:RGD.
GO:0000149; F:SNARE binding; IPI:RGD.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045955; P:negative regulation of calcium ion-dependent exocytosis; IMP:RGD.::GO:0035544; P:negative regulation of SNARE complex assembly; IDA:RGD.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0016079; P:synaptic vesicle exocytosis; IEP:RGD.
319Q5D7I9    495   TRIM5_PYGNE Tripartite motif-containing prote...730.15     38.1     26     47GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
320Q9C026    710   TRIM9_HUMAN E3 ubiquitin-protein ligase TRIM9...350.16     38.5     37     51GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IDA:UniProtKB.::GO:0008021; C:synaptic vesicle; IEA:UniProtKB-SubCell.
GO:0042803; F:protein homodimerization activity; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
321Q810L3    664   CHFR_MOUSE E3 ubiquitin-protein ligase CHFR O...460.16     38.1     39     52GO:0016605; C:PML body; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; ISS:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IMP:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007093; P:mitotic cell cycle checkpoint; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:MGI.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:MGI.
322O42845    251   YFH7_SCHPO Uncharacterized RING finger protei...410.16     37.7     41     54GO:0005737; C:cytoplasm; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
323Q3UWA4    246   TRI40_MOUSE Tripartite motif-containing prote...580.16     37.7     33     48GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
324Q8GX84    343   C3H1_ARATH Zinc finger CCCH domain-containing...400.16     37.7     35     45
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
325Q8JIR0    320   BMI1A_DANRE Polycomb complex protein BMI-1-A ...540.16     37.7     33     52GO:0031519; C:PcG protein complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
326A6NCK2    446   TR43B_HUMAN Tripartite motif-containing prote...430.16     38.1     44     53GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
327Q29RQ5    710   TRIM9_BOVIN E3 ubiquitin-protein ligase TRIM9...350.17     38.1     37     51GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0008021; C:synaptic vesicle; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
328Q6MFY8    247   TRI40_RAT Tripartite motif-containing protein...580.17     37.4     33     50GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
329Q5BN31    494   TRIM5_SAIBB Tripartite motif-containing prote...640.17     38.1     30     48GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
330Q9C895    900   BRE1B_ARATH E3 ubiquitin-protein ligase BRE1-...520.17     38.1     35     50GO:0005634; C:nucleus; IDA:TAIR.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0042803; F:protein homodimerization activity; IPI:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033523; P:histone H2B ubiquitination; IMP:TAIR.::GO:0010390; P:histone monoubiquitination; IMP:TAIR.::GO:0009965; P:leaf morphogenesis; IMP:TAIR.::GO:0010162; P:seed dormancy process; IMP:TAIR.::GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:TAIR.
331Q9H2S5    420   RNF39_HUMAN RING finger protein 39 OS=Homo sa...850.18     37.7     26     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; NAS:UniProtKB.
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