UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YCR057C

Length:

923

Number of sequences:

5887

Description:

YCR057C PWP2 SGDID:S000000653, Chr III from 223228-220457, Genome Release 64-1-1, reverse complement, Verified ORF, "Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA precursor at A0, A1, and A2 sites; contains eight WD-repeats; PWP2 deletion leads to defects in cell cycle and bud morphogenesis"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
991	Q75E14	518	IPI3_ASHGO Pre-rRNA-processing protein IPI3 O...	178	0.0004	47.8	25	44	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
992	Q9D180	1249	WDR65_MOUSE WD repeat-containing protein 65 O...	231	0.16	39.7	18	39
993	Q99698	3801	LYST_HUMAN Lysosomal-trafficking regulator OS...	172	0.89	37.4	23	44	GO:0015630; C:microtubule cytoskeleton; IDA:UniProtKB.
									GO:0005515; F:protein binding; IPI:UniProtKB.
									GO:0042742; P:defense response to bacterium; ISS:UniProtKB.::GO:0042832; P:defense response to protozoan; ISS:UniProtKB.::GO:0051607; P:defense response to virus; ISS:UniProtKB.::GO:0032510; P:endosome to lysosome transport via multivesicular body sorting pathway; IMP:UniProtKB.::GO:0030595; P:leukocyte chemotaxis; ISS:UniProtKB.::GO:0033364; P:mast cell secretory granule organization; ISS:UniProtKB.::GO:0032438; P:melanosome organization; ISS:UniProtKB.::GO:0042267; P:natural killer cell mediated cytotoxicity; IMP:UniProtKB.
994	Q6GPU3	711	DTLB_XENLA Denticleless protein homolog B OS=...	159	4.4	34.7	24	43	GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
995	O60097	526	SPT8_SCHPO Transcription factor spt8 OS=Schiz...	158	0.0004	47.8	27	43	GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.
									GO:0017025; F:TBP-class protein binding; ISS:PomBase.::GO:0003712; F:transcription cofactor activity; ISS:PomBase.
									GO:0048096; P:chromatin-mediated maintenance of transcription; IC:PomBase.::GO:0016573; P:histone acetylation; IC:PomBase.::GO:0010590; P:regulation of cytokinetic cell separation; IMP:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
996	A1D3I2	462	CIAO1_NEOFI Probable cytosolic iron-sulfur pr...	193	0.035	41.2	23	38
997	Q8BX17	1502	GEMI5_MOUSE Gem-associated protein 5 OS=Mus m...	190	0.33	38.5	23	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0017069; F:snRNA binding; ISS:UniProtKB.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
998	Q9R037	908	WDR44_RAT WD repeat-containing protein 44 OS=...	78	0.033	41.6	33	55	GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IDA:RGD.::GO:0048471; C:perinuclear region of cytoplasm; IDA:RGD.
									GO:0017137; F:Rab GTPase binding; IDA:RGD.
									GO:0030334; P:regulation of cell migration; IMP:RGD.
999	Q8TBZ3	569	WDR20_HUMAN WD repeat-containing protein 20 O...	93	5.2	34.3	27	43
1000	Q8N157	1196	AHI1_HUMAN Jouberin OS=Homo sapiens (Human). ...	130	0.0005	47.8	28	44	GO:0005912; C:adherens junction; IDA:UniProtKB.::GO:0005911; C:cell-cell junction; IDA:UniProtKB.::GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.::GO:0036038; C:TCTN-B9D complex; ISS:UniProtKB.
									GO:0005515; F:protein binding; IPI:UniProtKB.
									GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0035844; P:cloaca development; ISS:UniProtKB.::GO:0001947; P:heart looping; ISS:UniProtKB.::GO:0030902; P:hindbrain development; ISS:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0071599; P:otic vesicle development; ISS:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; ISS:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; ISS:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; ISS:UniProtKB.::GO:0050795; P:regulation of behavior; ISS:UniProtKB.::GO:0010842; P:retina layer formation; ISS:UniProtKB.::GO:0065001; P:specification of axis polarity; ISS:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; ISS:UniProtKB.::GO:0016192; P:vesicle-mediated transport; ISS:UniProtKB.

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