Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR057C
Length:
923
Number of sequences:
5887
Description:
YCR057C PWP2 SGDID:S000000653, Chr III from 223228-220457, Genome Release 64-1-1, reverse complement, Verified ORF, "Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA precursor at A0, A1, and A2 sites; contains eight WD-repeats; PWP2 deletion leads to defects in cell cycle and bud morphogenesis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
961A2QI22    490   YTM1_ASPNC Ribosome biogenesis protein ytm1 O...2570.12     39.7     23     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
962Q7ZX22    780   WDR24_XENLA WD repeat-containing protein 24 O...1900.0002     48.5     22     42
963P40042    185   RRT13_YEAST Regulator of rDNA transcription p...1820.0002     46.6     29     49
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
964Q54RP0    648   AGTA_DICDI UDP-galactose:fucoside alpha-3-gal...4452.7     35.4     18     39GO:0005737; C:cytoplasm; TAS:dictyBase.
GO:0004381; F:fucosylgalactoside 3-alpha-galactosyltransferase activity; IEA:EC.
GO:0006486; P:protein glycosylation; IDA:dictyBase.
965Q54W52    463   WDR12_DICDI Ribosome biogenesis protein WDR12...1273     35     29     45GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
966Q9H6Y2    383   WDR55_HUMAN WD repeat-containing protein 55 O...1590.015     42.4     25     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
967Q5AB15    505   IPI3_CANAL Pre-rRNA-processing protein IPI3 O...2740.16     39.3     21     36GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
968Q5R650    495   WDR37_PONAB WD repeat-containing protein 37 O...2850.29     38.5     19     39
969Q5XII5    532   WAP53_RAT Telomerase Cajal body protein 1 OS=...1270.019     42.4     26     43GO:0015030; C:Cajal body; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005697; C:telomerase holoenzyme complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0051973; P:positive regulation of telomerase activity; ISS:UniProtKB.::GO:0032203; P:telomere formation via telomerase; ISS:UniProtKB.
970O22468    415   MSI2_ARATH WD-40 repeat-containing protein MS...1970.032     41.6     22     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
971Q6ZPG2    1874   WDR90_MOUSE WD repeat-containing protein 90 O...3793.1     35.4     18     34
972Q4I7L0    423   HAT2_GIBZE Histone acetyltransferase type B s...2130.004     44.3     26     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
973B4KTK4    331   CIAO1_DROMO Probable cytosolic iron-sulfur pr...2430.23     38.5     21     37
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
974Q5XJS5    323   THOC6_DANRE THO complex subunit 6 homolog OS=...2120.008     43.1     22     42
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
975Q54QU5    359   WDR89_DICDI WD repeat-containing protein 89 h...1256.5     33.9     22     41
976Q5R4T8    445   DCA13_PONAB DDB1- and CUL4-associated factor ...1894.9     34.3     20     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
977B3RQN1    432   WDR12_TRIAD Ribosome biogenesis protein WDR12...1450.39     38.1     22     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
978Q6DIF4    607   WDR1_XENTR WD repeat-containing protein 1 OS=...1271.1     36.6     20     41GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
979E9Q349    535   WDR25_MOUSE WD repeat-containing protein 25 O...920.5     37.7     28     49
980Q55DM1    3619   LVSA_DICDI BEACH domain-containing protein lv...1720.0003     48.5     26     44GO:0031164; C:contractile vacuolar membrane; IDA:dictyBase.::GO:0005624; C:membrane fraction; IDA:dictyBase.::GO:0005625; C:soluble fraction; IDA:dictyBase.
GO:0005543; F:phospholipid binding; IDA:dictyBase.
GO:0007155; P:cell adhesion; IMP:dictyBase.::GO:0006874; P:cellular calcium ion homeostasis; IMP:dictyBase.::GO:0033298; P:contractile vacuole organization; IMP:dictyBase.::GO:0000915; P:cytokinesis, actomyosin contractile ring assembly; IMP:dictyBase.::GO:0007032; P:endosome organization; IMP:dictyBase.::GO:0007041; P:lysosomal transport; ISS:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.
981Q7RXH4    346   EIF3I_NEUCR Eukaryotic translation initiation...1071.5     35.8     24     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
982A6NE52    1622   K1875_HUMAN WD repeat-containing protein KIAA...730.0003     48.5     37     53
983Q12024    460   YTM1_YEAST Ribosome biogenesis protein YTM1 O...2020.15     39.3     22     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051276; P:chromosome organization; IGI:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
984A6ZPA9    460   YTM1_YEAS7 Ribosome biogenesis protein YTM1 O...2020.15     39.3     22     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
985Q6NVS5    445   DCA13_XENTR DDB1- and CUL4-associated factor ...800.37     38.1     26     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
986Q9XSC3    912   WDR44_BOVIN WD repeat-containing protein 44 O...580.04     41.6     36     59GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
987Q9HBG6    1241   IF122_HUMAN Intraflagellar transport protein ...720.75     37.4     25     49GO:0005737; C:cytoplasm; IDA:HPA.::GO:0019861; C:flagellum; IEA:UniProtKB-KW.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.::GO:0032391; C:photoreceptor connecting cilium; ISS:UniProtKB.
GO:0048593; P:camera-type eye morphogenesis; ISS:UniProtKB.::GO:0060271; P:cilium morphogenesis; ISS:UniProtKB.::GO:0010172; P:embryonic body morphogenesis; ISS:UniProtKB.::GO:0035050; P:embryonic heart tube development; ISS:UniProtKB.::GO:0060173; P:limb development; ISS:UniProtKB.::GO:0001843; P:neural tube closure; ISS:UniProtKB.
988Q64LD2    544   WDR25_HUMAN WD repeat-containing protein 25 O...1310.0004     47.8     26     48
989B4JPT9    419   WDR12_DROGR Ribosome biogenesis protein WDR12...1160.29     38.5     25     46GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
990Q9Z2K5    326   LST8_RAT Target of rapamycin complex subunit ...2280.81     36.6     22     40GO:0005829; C:cytosol; IDA:RGD.
991Q75E14    518   IPI3_ASHGO Pre-rRNA-processing protein IPI3 O...1780.0004     47.8     25     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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