Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR057C
Length:
923
Number of sequences:
5887
Description:
YCR057C PWP2 SGDID:S000000653, Chr III from 223228-220457, Genome Release 64-1-1, reverse complement, Verified ORF, "Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA precursor at A0, A1, and A2 sites; contains eight WD-repeats; PWP2 deletion leads to defects in cell cycle and bud morphogenesis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
901Q9LJR3    845   SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidop...1500.00008     50.1     25     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
902Q9BVC4    326   LST8_HUMAN Target of rapamycin complex subuni...1830.18     38.9     20     42GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; TAS:Reactome.::GO:0032008; P:positive regulation of TOR signaling cascade; IMP:UniProtKB.::GO:0032956; P:regulation of actin cytoskeleton organization; IMP:UniProtKB.::GO:0031295; P:T cell costimulation; TAS:Reactome.
903Q6CU59    444   YTM1_KLULA Ribosome biogenesis protein YTM1 O...1282.5     35.4     24     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
904Q498F0    912   WDR44_XENLA WD repeat-containing protein 44 O...580.03     42     36     59GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
905Q5XUX1    488   FBXW9_HUMAN F-box/WD repeat-containing protei...1690.00009     49.7     28     41
GO:0005515; F:protein binding; IPI:IntAct.
906Q54J37    827   STRN_DICDI Striatin homolog OS=Dictyostelium ...1600.0005     47.4     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
907Q803V5    326   LST8_DANRE Target of rapamycin complex subuni...2538.2     33.5     20     36GO:0005737; C:cytoplasm; ISS:UniProtKB.
908A4IIX9    494   WDR37_XENTR WD repeat-containing protein 37 O...2830.28     38.5     19     37
909Q7KWK5    514   PRP19_DICDI Pre-mRNA-processing factor 19 hom...2272     35.8     20     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:dictyBase.::GO:0000151; C:ubiquitin ligase complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:dictyBase.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase.
910Q86Y33    519   CD20B_HUMAN Cell division cycle protein 20 ho...1371.8     35.8     22     43
911B4KE10    506   WDR55_DROMO WD repeat-containing protein 55 h...2830.0001     49.3     21     38
912P39946    494   LIS1_YEAST Nuclear distribution protein PAC1 ...2960.0001     49.3     22     39GO:0005881; C:cytoplasmic microtubule; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051010; F:microtubule plus-end binding; IDA:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0030473; P:nuclear migration along microtubule; IMP:SGD.
913A6ZPA6    494   LIS1_YEAS7 Nuclear distribution protein PAC1 ...2960.0001     49.3     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
914A1CJY4    340   EIF3I_ASPCL Eukaryotic translation initiation...3450.077     40     19     34GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
915B4QFZ8    335   CIAO1_DROSI Probable cytosolic iron-sulfur pr...960.47     37.4     28     49
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
916O14011    488   CWF8_SCHPO Pre-mRNA-splicing factor cwf8 OS=S...1561.8     35.8     22     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0005635; C:nuclear envelope; IDA:PomBase.::GO:0005681; C:spliceosomal complex; TAS:PomBase.::GO:0000151; C:ubiquitin ligase complex; TAS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; TAS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; TAS:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:PomBase.
917Q94BM7    794   SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidop...947     34.3     26     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
918Q2UGK1    487   YTM1_ASPOR Ribosome biogenesis protein ytm1 O...2040.056     40.8     25     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
919O74340    436   DCA13_SCHPO Protein sof1 OS=Schizosaccharomyc...3540.95     36.6     22     37GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
920O75717    1129   WDHD1_HUMAN WD repeat and HMG-box DNA-binding...3284.5     34.7     20     38GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005654; C:nucleoplasm; TAS:ProtInc.
GO:0003677; F:DNA binding; TAS:ProtInc.
921O74845    564   YCY9_SCHPO Uncharacterized WD repeat-containi...2470.0001     49.3     23     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0070210; C:Rpd3L-Expanded complex; IDA:PomBase.::GO:0034967; C:Set3 complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0006342; P:chromatin silencing; ISS:PomBase.::GO:0016575; P:histone deacetylation; ISS:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:PomBase.
922A6ZQL5    714   MDV1_YEAS7 Mitochondrial division protein 1 O...710.053     40.8     24     51GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
923B5DG67    423   WDR12_SALSA Ribosome biogenesis protein wdr12...3480.016     42.4     22     39GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
924Q9VUI3    1076   EMAL_DROME Echinoderm microtubule-associated ...2210.004     44.7     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0071683; C:sensory dendrite; IDA:FlyBase.
GO:0008017; F:microtubule binding; IDA:FlyBase.
GO:0008344; P:adult locomotory behavior; IMP:FlyBase.::GO:0035556; P:intracellular signal transduction; IEA:InterPro.::GO:0007605; P:sensory perception of sound; IMP:FlyBase.
925Q9FKR9    472   C3H59_ARATH Zinc finger CCCH domain-containin...974.7     34.7     29     49
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
926Q8IWB7    410   WDFY1_HUMAN WD repeat and FYVE domain-contain...2371.4     36.2     21     38GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005769; C:early endosome; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005545; F:1-phosphatidylinositol binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
927Q09019    674   DMWD_HUMAN Dystrophia myotonica WD repeat-con...925.6     34.3     24     41
GO:0007126; P:meiosis; NAS:UniProtKB.
928Q9BUR4    548   WAP53_HUMAN Telomerase Cajal body protein 1 O...1260.35     38.1     26     42GO:0015030; C:Cajal body; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005697; C:telomerase holoenzyme complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IDA:UniProtKB.
GO:0051973; P:positive regulation of telomerase activity; IDA:UniProtKB.::GO:0032203; P:telomere formation via telomerase; IMP:UniProtKB.
929Q1DJF7    465   YTM1_COCIM Ribosome biogenesis protein YTM1 O...2010.008     43.5     24     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
930Q6NWV3    1182   IF122_MOUSE Intraflagellar transport protein ...1623.5     35     20     36GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.::GO:0032391; C:photoreceptor connecting cilium; IDA:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0048593; P:camera-type eye morphogenesis; IMP:UniProtKB.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0009953; P:dorsal/ventral pattern formation; IMP:MGI.::GO:0010172; P:embryonic body morphogenesis; IMP:UniProtKB.::GO:0042733; P:embryonic digit morphogenesis; IMP:MGI.::GO:0035050; P:embryonic heart tube development; IMP:UniProtKB.::GO:0001843; P:neural tube closure; IMP:UniProtKB.
931A7EF03    335   EIF3I_SCLS1 Eukaryotic translation initiation...504.1     34.7     32     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
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