Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR057C
Length:
923
Number of sequences:
5887
Description:
YCR057C PWP2 SGDID:S000000653, Chr III from 223228-220457, Genome Release 64-1-1, reverse complement, Verified ORF, "Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA precursor at A0, A1, and A2 sites; contains eight WD-repeats; PWP2 deletion leads to defects in cell cycle and bud morphogenesis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841Q13610    501   PWP1_HUMAN Periodic tryptophan protein 1 homo...1700.00002     51.6     28     46GO:0005634; C:nucleus; TAS:ProtInc.
GO:0006351; P:transcription, DNA-dependent; TAS:ProtInc.
842P47025    714   MDV1_YEAST Mitochondrial division protein 1 O...710.054     40.8     24     51GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.
843Q7ZVR1    832   WDR75_DANRE WD repeat-containing protein 75 O...691.4     36.6     32     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
844Q54ZP5    1172   WDR48_DICDI WD repeat-containing protein 48 h...781.6     36.2     26     46
845B2ZZS9    400   WDR55_ORYLA WD repeat-containing protein 55 O...1920.002     45.4     23     45GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0001654; P:eye development; IMP:UniProtKB.::GO:0060322; P:head development; IMP:UniProtKB.::GO:0001889; P:liver development; IMP:UniProtKB.::GO:0060465; P:pharynx development; IMP:UniProtKB.::GO:0006364; P:rRNA processing; IMP:UniProtKB.::GO:0048536; P:spleen development; IMP:UniProtKB.::GO:0048538; P:thymus development; IMP:UniProtKB.
846Q96MR6    1250   WDR65_HUMAN WD repeat-containing protein 65 O...2540.47     38.1     17     38
847A1L112    384   WDR55_RAT WD repeat-containing protein 55 OS=...1590.011     42.7     24     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
848O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...1270.46     37.7     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
849Q759L2    346   EIF3I_ASHGO Eukaryotic translation initiation...1772.4     35.4     23     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
850B4M4W4    504   WDR55_DROVI WD repeat-containing protein 55 h...2980.0002     48.9     20     41
851Q5ZJW8    720   DTL_CHICK Denticleless protein homolog OS=Gal...1557.5     33.9     23     46GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
852O94289    713   LUB1_SCHPO Ubiquitin homeostasis protein lub1...2330.00003     51.6     27     44GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0043130; F:ubiquitin binding; ISS:PomBase.
GO:0006281; P:DNA repair; ISS:PomBase.::GO:0016574; P:histone ubiquitination; NAS:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:PomBase.
853Q4WX90    340   EIF3I_ASPFU Eukaryotic translation initiation...2051.6     35.8     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
854B0XYC8    340   EIF3I_ASPFC Eukaryotic translation initiation...2051.6     35.8     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
855A8IR43    444   WDR12_CHLRE Ribosome biogenesis protein WDR12...2621.7     35.8     19     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
856Q2HJ56    500   PWP1_BOVIN Periodic tryptophan protein 1 homo...1690.00003     51.2     28     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
857O00628    323   PEX7_HUMAN Peroxisomal targeting signal 2 rec...1573.7     34.7     25     41GO:0005777; C:peroxisome; IDA:UniProtKB.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IDA:UniProtKB.
GO:0008611; P:ether lipid biosynthetic process; IMP:UniProtKB.::GO:0016558; P:protein import into peroxisome matrix; IMP:UniProtKB.
858Q5M7T1    339   CIAO1_RAT Probable cytosolic iron-sulfur prot...3361.1     36.2     18     38GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
859Q6ED65    1977   EMAL5_RAT Echinoderm microtubule-associated p...1091.2     36.6     22     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
860Q0DYP5    435   C3H17_ORYSJ Zinc finger CCCH domain-containin...1322.3     35.4     27     41
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
861B3P4F8    498   WDR55_DROER WD repeat-containing protein 55 h...3490.00003     51.2     21     39
862Q0VC24    423   WDR12_BOVIN Ribosome biogenesis protein WDR12...1633.4     35     25     40GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
863P79083    328   EIF3I_SCHPO Eukaryotic translation initiation...1588.1     33.5     25     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0016282; C:eukaryotic 43S preinitiation complex; IDA:PomBase.::GO:0071540; C:eukaryotic translation initiation factor 3 complex, eIF3e; IDA:PomBase.::GO:0071541; C:eukaryotic translation initiation factor 3 complex, eIF3m; IDA:PomBase.::GO:0034399; C:nuclear periphery; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0065007; P:biological regulation; NAS:PomBase.::GO:0071470; P:cellular response to osmotic stress; IMP:PomBase.::GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.
864Q99KN2    339   CIAO1_MOUSE Probable cytosolic iron-sulfur pr...3360.24     38.5     18     38GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:MGI.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:MGI.
865Q4X0A9    696   SCONB_ASPFU Probable E3 ubiquitin ligase comp...1070.005     44.3     30     50
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
866B0XTS1    696   SCONB_ASPFC Probable E3 ubiquitin ligase comp...1070.005     44.3     30     50
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
867Q8BQM8    1977   EMAL5_MOUSE Echinoderm microtubule-associated...1091.1     37     22     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
868Q55FJ0    2179   LVSG_DICDI Probable inactive serine/threonine...1470.00004     51.6     26     46
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0004672; F:protein kinase activity; IEA:InterPro.
869A8WGF4    1189   IF122_XENTR Intraflagellar transport protein ...2780.16     39.7     22     41GO:0005929; C:cilium; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
870B3MC74    335   CIAO1_DROAN Probable cytosolic iron-sulfur pr...2450.41     37.7     20     38
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
871Q91WG4    831   ELP2_MOUSE Elongator complex protein 2 OS=Mus...1564.3     34.7     24     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0061133; F:endopeptidase activator activity; ISS:UniProtKB.::GO:0019901; F:protein kinase binding; IDA:MGI.
GO:0043248; P:proteasome assembly; ISS:UniProtKB.::GO:0046425; P:regulation of JAK-STAT cascade; IDA:MGI.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
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