Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR057C
Length:
923
Number of sequences:
5887
Description:
YCR057C PWP2 SGDID:S000000653, Chr III from 223228-220457, Genome Release 64-1-1, reverse complement, Verified ORF, "Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA precursor at A0, A1, and A2 sites; contains eight WD-repeats; PWP2 deletion leads to defects in cell cycle and bud morphogenesis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451Q5XGE2    515   UTP15_XENTR U3 small nucleolar RNA-associated...780.92     37     28     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
452Q5SRY7    542   FBW1B_MOUSE F-box/WD repeat-containing protei...2540.017     42.4     21     44GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:UniProtKB.
GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0042347; P:negative regulation of NF-kappaB import into nucleus; IMP:UniProtKB.::GO:0042753; P:positive regulation of circadian rhythm; IMP:UniProtKB.::GO:0045862; P:positive regulation of proteolysis; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006470; P:protein dephosphorylation; IDA:UniProtKB.::GO:0031648; P:protein destabilization; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
453Q9QXE7    527   TBL1X_MOUSE F-box-like/WD repeat-containing p...2800.0000000004     67     23     42GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0045444; P:fat cell differentiation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0043627; P:response to estrogen stimulus; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
454Q8N9V3    476   WSDU1_HUMAN WD repeat, SAM and U-box domain-c...2231.7     35.8     23     36GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
455O55106    780   STRN_MOUSE Striatin OS=Mus musculus (Mouse). ...3912.3     35.8     20     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
456Q6CGP9    532   PFS2_YARLI Polyadenylation factor subunit 2 O...3652     35.8     20     33GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
457Q2H139    657   MDV1_CHAGB Mitochondrial division protein 1 O...1020.022     42.4     27     46GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
458P93563    377   GBB_SOLTU Guanine nucleotide-binding protein ...3010.16     39.3     21     37
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
459O94967    919   WDR47_HUMAN WD repeat-containing protein 47 O...3290.00002     52.8     22     38
460Q7S8R5    645   MDV1_NEUCR Mitochondrial division protein 1 O...3010.0007     47     21     37GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
461P38262    535   SIF2_YEAST SIR4-interacting protein SIF2 OS=S...3290.07     40.4     19     36GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.::GO:0034967; C:Set3 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016575; P:histone deacetylation; IDA:SGD.::GO:0031939; P:negative regulation of chromatin silencing at telomere; IMP:SGD.::GO:0045835; P:negative regulation of meiosis; IPI:SGD.::GO:0032874; P:positive regulation of stress-activated MAPK cascade; IMP:SGD.
462O18640    318   GBLP_DROME Guanine nucleotide-binding protein...1390.0005     47     22     41GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0042335; P:cuticle development; IMP:FlyBase.::GO:0007626; P:locomotory behavior; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0018991; P:oviposition; IMP:FlyBase.::GO:0035220; P:wing disc development; IMP:FlyBase.
463Q9DAJ4    315   WDR83_MOUSE WD repeat domain-containing prote...1441.5     35.8     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
464P39014    640   MET30_YEAST F-box protein MET30 OS=Saccharomy...1300.029     42     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043224; C:nuclear SCF ubiquitin ligase complex; IDA:SGD.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0019344; P:cysteine biosynthetic process; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000087; P:M phase of mitotic cell cycle; IMP:SGD.::GO:0009086; P:methionine biosynthetic process; IEA:UniProtKB-KW.::GO:0000209; P:protein polyubiquitination; IMP:SGD.::GO:0030174; P:regulation of DNA-dependent DNA replication initiation; IMP:SGD.::GO:0000114; P:regulation of transcription involved in G1 phase of mitotic cell cycle; IMP:SGD.::GO:0046685; P:response to arsenic-containing substance; IDA:SGD.::GO:0046686; P:response to cadmium ion; IDA:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
465P70483    780   STRN_RAT Striatin OS=Rattus norvegicus (Rat)....3910.081     40.4     20     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0014069; C:postsynaptic density; IDA:RGD.::GO:0045211; C:postsynaptic membrane; IDA:RGD.
GO:0048306; F:calcium-dependent protein binding; NAS:RGD.::GO:0005516; F:calmodulin binding; IDA:RGD.
GO:0016358; P:dendrite development; IMP:RGD.::GO:0007626; P:locomotory behavior; IMP:RGD.
466O54927    421   WSB1_MOUSE WD repeat and SOCS box-containing ...790.38     38.1     25     48
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
467Q676U5    607   A16L1_HUMAN Autophagy-related protein 16-1 OS...583     35.4     29     53GO:0005776; C:autophagic vacuole; ISS:UniProtKB.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000045; P:autophagic vacuole assembly; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
468P49027    334   GBLPA_ORYSJ Guanine nucleotide-binding protei...3540.00006     49.7     25     40GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0050832; P:defense response to fungus; IMP:UniProtKB.::GO:0060267; P:positive regulation of respiratory burst; IMP:UniProtKB.
469Q4R8H1    569   TBL1X_MACFA F-box-like/WD repeat-containing p...2840.000000002     64.7     23     43GO:0005876; C:spindle microtubule; ISS:UniProtKB.::GO:0017053; C:transcriptional repressor complex; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; ISS:UniProtKB.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0003714; F:transcription corepressor activity; ISS:UniProtKB.
GO:0060070; P:canonical Wnt receptor signaling pathway; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006508; P:proteolysis; ISS:UniProtKB.::GO:0007605; P:sensory perception of sound; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
470Q5AXW3    654   MDV1_EMENI Mitochondrial division protein 1 O...2870.000005     53.9     21     37GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
471Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...1380.22     38.9     25     40GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
472Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...1950.13     39.7     23     36GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
473Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...1510.032     41.2     24     45
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
474A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...2940.3     38.1     22     34
475Q8BHB4    942   WDR3_MOUSE WD repeat-containing protein 3 OS=...1362.9     35.4     25     35GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
476Q00659    678   SCONB_EMENI Probable E3 ubiquitin ligase comp...1740.0006     47.4     27     43
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
477Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...2132.3     35.4     21     39GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
478A2R3Z3    657   MDV1_ASPNC Mitochondrial division protein 1 O...3820.002     45.8     20     36GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
479Q6GL39    313   WDR82_XENTR WD repeat-containing protein 82 O...2990.11     39.3     21     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
480Q5DFU0    352   CIAO1_SCHJA Probable cytosolic iron-sulfur pr...2200.0007     46.6     23     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
481Q5ZMV7    313   WDR82_CHICK WD repeat-containing protein 82 O...2800.049     40.4     22     35GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
records
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