UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YCR028C-A

Length:

135

Number of sequences:

5887

Description:

YCR028C-A RIM1 SGDID:S000007222, Chr III from 173115-172950,173440-173199, Genome Release 64-1-1, reverse complement, Verified ORF, "Single-stranded DNA-binding protein essential for mitochondrial genome maintenance; involved in mitochondrial DNA replication"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
31	P18022	175	SSBP_ECOLX Plasmid-derived single-stranded DN...	78	0.27	33.9	29	47
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
32	P28045	175	SSBR_ECOLX Plasmid-derived single-stranded DN...	78	0.28	33.9	29	47
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
33	Q32PB0	148	SSBP_BOVIN Single-stranded DNA-binding protei...	100	0.28	33.5	22	46	GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.
									GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
34	P40947	165	SSB_PSEAE Single-stranded DNA-binding protein...	103	0.28	33.5	28	44
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
35	Q5RDQ0	148	SSBP_PONAB Single-stranded DNA-binding protei...	120	0.77	32.3	21	46	GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.
									GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
36	Q9CJP4	166	SSB_PASMU Single-stranded DNA-binding protein...	78	0.96	32.3	35	47
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
37	P09381	148	SSBPB_XENLA Single-stranded DNA-binding prote...	101	0.96	32	23	45	GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.
									GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
38	Q8VMM4	180	SSBW_PSEPU Single-stranded DNA-binding protei...	107	1.1	32	26	46
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
39	P59930	176	SSB_HAEDU Single-stranded DNA-binding protein...	122	1.1	32	25	40
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
40	P28046	174	SSB_PROMI Single-stranded DNA-binding protein...	77	1.1	32	26	47
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
41	Q04837	148	SSBP_HUMAN Single-stranded DNA-binding protei...	120	1.1	32	21	46	GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.
									GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0051096; P:positive regulation of helicase activity; IDA:UniProtKB.
42	Q8PIJ2	180	SSB_XANAC Single-stranded DNA-binding protein...	105	1.2	32	24	48
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
43	Q9XJG4	162	SSB_BPP1 Single-stranded DNA-binding protein ...	109	1.2	32	24	44
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
44	Q9PHE7	136	SSB1_XYLFA Single-stranded DNA-binding protei...	111	1.4	31.6	21	48
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
45	P18310	179	SSBF_ECOLI Plasmid-derived single-stranded DN...	90	2	31.2	28	44
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
46	Q8Y2B4	178	SSB_RALSO Single-stranded DNA-binding protein...	104	3.1	30.8	24	43
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
47	Q89A53	166	SSB_BUCBP Single-stranded DNA-binding protein...	78	3.2	30.8	27	51
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
48	P0AGE3	178	SSB_SHIFL Single-stranded DNA-binding protein...	32	3.5	30.4	38	63
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
49	P0AGE0	178	SSB_ECOLI Single-stranded DNA-binding protein...	32	3.5	30.4	38	63
									GO:0003697; F:single-stranded DNA binding; IDA:EcoCyc.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006298; P:mismatch repair; TAS:EcoCyc.::GO:0000725; P:recombinational repair; TAS:EcoCyc.::GO:0009432; P:SOS response; TAS:EcoCyc.
50	P0AGE1	178	SSB_ECOL6 Single-stranded DNA-binding protein...	32	3.5	30.4	38	63
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
51	P0AGE2	178	SSB_ECO57 Single-stranded DNA-binding protein...	32	3.5	30.4	38	63
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
52	P77953	226	SSB_SHEHA Single-stranded DNA-binding protein...	75	3.7	30.4	27	49
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
53	P54622	146	SSBP_DROME Single-stranded DNA-binding protei...	99	3.9	30.4	20	49	GO:0000262; C:mitochondrial chromosome; IDA:FlyBase.
									GO:0003697; F:single-stranded DNA binding; IDA:UniProtKB.
									GO:0006264; P:mitochondrial DNA replication; IDA:UniProtKB.
54	P09380	146	SSBPA_XENLA Single-stranded DNA-binding prote...	84	4.5	30	24	46	GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.
									GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
55	Q8P778	172	SSB_XANCP Single-stranded DNA-binding protein...	105	5	30	25	50
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
56	Q8EA81	238	SSB_SHEON Single-stranded DNA-binding protein...	77	5.8	30	25	48
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
57	Q8KSB6	171	SSB_ARTAU Single-stranded DNA-binding protein...	107	5.8	30	27	47
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
58	Q8EWT6	189	SSB_MYCPE Single-stranded DNA-binding protein...	116	6	30	23	42
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
59	P57610	171	SSB_BUCAI Single-stranded DNA-binding protein...	99	6.4	29.6	21	46
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
60	Q8ZJ06	182	SSB_YERPE Single-stranded DNA-binding protein...	76	7.1	29.6	28	46
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
61	Q87LA3	176	SSB_VIBPA Single-stranded DNA-binding protein...	78	8.7	29.3	28	47
									GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.

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