Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR018C
Length:
221
Number of sequences:
5887
Description:
YCR018C SRD1 SGDID:S000000611, Chr III from 148903-148238, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in the processing of pre-rRNA to mature rRNA; contains a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q8L4M6    269   GATA3_ARATH GATA transcription factor 3 OS=Ar...590.18     35.8     29     56GO:0005730; C:nucleolus; IDA:TAIR.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007623; P:circadian rhythm; IEP:TAIR.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
32P40569    121   GAT4_YEAST Protein GAT4 OS=Saccharomyces cere...680.2     34.7     32     50
GO:0043565; F:sequence-specific DNA binding; IDA:SGD.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
33Q8LC79    295   GAT18_ARATH GATA transcription factor 18 OS=A...470.21     35.8     40     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009790; P:embryo development; IMP:TAIR.::GO:0009909; P:regulation of flower development; IGI:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
34Q54NM5    640   GTAL_DICDI GATA zinc finger domain-containing...370.21     36.2     41     62
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
35Q6QPM2    211   GAT19_ARATH GATA transcription factor 19 OS=A...460.24     35.4     37     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
36Q54L80    356   GTAQ_DICDI GATA zinc finger domain-containing...730.28     35.4     34     47
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
37Q10134    564   FEP1_SCHPO Iron-sensing transcription factor ...300.35     35.4     53     60GO:0005634; C:nucleus; IDA:PomBase.
GO:0042803; F:protein homodimerization activity; IDA:PomBase.::GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:PomBase.::GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; NAS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006879; P:cellular iron ion homeostasis; TAS:PomBase.::GO:0090375; P:negative regulation of transcription from RNA polymerase II promoter in response to iron ion starvation; IMP:PomBase.::GO:0034756; P:regulation of iron ion transport; IMP:PomBase.
38Q9SD38    312   GATA6_ARATH GATA transcription factor 6 OS=Ar...320.38     35     41     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0009416; P:response to light stimulus; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
39O82632    308   GATA9_ARATH GATA transcription factor 9 OS=Ar...360.38     35     39     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007623; P:circadian rhythm; IEP:TAIR.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0009416; P:response to light stimulus; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40O49743    240   GATA4_ARATH GATA transcription factor 4 OS=Ar...400.39     34.7     40     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0009416; P:response to light stimulus; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
41Q8LAU9    274   GATA1_ARATH GATA transcription factor 1 OS=Ar...320.4     35     41     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0044212; F:transcription regulatory region DNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007623; P:circadian rhythm; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
42Q54V37    312   GTAT_DICDI GATA zinc finger domain-containing...440.49     34.7     48     55
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
43P69781    331   GAT12_ARATH GATA transcription factor 12 OS=A...610.49     34.7     31     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007623; P:circadian rhythm; IEP:TAIR.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0009416; P:response to light stimulus; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
44Q8LG10    149   GAT15_ARATH GATA transcription factor 15 OS=A...320.54     33.9     41     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
45Q9M1U2    204   GAT14_ARATH GATA transcription factor 14 OS=A...320.74     33.9     44     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
46Q550D5    872   GTAA_DICDI Transcription factor stalky OS=Dic...440.88     34.3     36     50GO:0005634; C:nucleus; IDA:dictyBase.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:dictyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045595; P:regulation of cell differentiation; IMP:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
47Q9FJ10    139   GAT16_ARATH GATA transcription factor 16 OS=A...300.95     33.1     40     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
48O65515    238   GATA7_ARATH GATA transcription factor 7 OS=Ar...301.5     33.1     43     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007623; P:circadian rhythm; IEP:TAIR.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0009416; P:response to light stimulus; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
49Q9LIB5    190   GAT17_ARATH GATA transcription factor 17 OS=A...451.7     32.7     38     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
50P43574    510   GAT1_YEAST Transcriptional regulatory protein...651.8     33.1     37     51GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IMP:SGD.::GO:0001076; F:RNA polymerase II transcription factor binding transcription factor activity; IMP:SGD.::GO:0043565; F:sequence-specific DNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0001080; P:nitrogen catabolite activation of transcription from RNA polymerase II promoter; IMP:SGD.
51Q03RW0    277   ACCD_LACBA Acetyl-coenzyme A carboxylase carb...572.1     32.7     33     47GO:0009317; C:acetyl-CoA carboxylase complex; IEA:InterPro.
GO:0003989; F:acetyl-CoA carboxylase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW.
52Q5PP38    470   GAT27_ARATH GATA transcription factor 27 OS=A...325.1     31.6     41     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
53P20951    1547   RDRP_PMV RNA replication protein OS=Papaya mo...905.6     32     24     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008174; F:mRNA methyltransferase activity; IEA:InterPro.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.
54Q9LT45    208   GAT29_ARATH GATA transcription factor 29 OS=A...467.2     30.8     35     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
55Q9USM3    418   SFH1_SCHPO Chromatin structure-remodeling com...207.5     31.2     55     75GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043044; P:ATP-dependent chromatin remodeling; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
56P78714    530   WC2_NEUCR White collar 2 protein OS=1257 / FG...288.5     31.2     39     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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