Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCL037C
Length:
434
Number of sequences:
5887
Description:
YCL037C SRO9 SGDID:S000000542, Chr III from 58678-57374, Genome Release 64-1-1, reverse complement, Verified ORF, "Cytoplasmic RNA-binding protein that associates with translating ribosomes; involved in heme regulation of Hap1p as a component of the HMC complex, also involved in the organization of actin filaments; contains a La motif"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P25567    434   SRO9_YEAST RNA-binding protein SRO9 OS=Saccha...4340     894     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005844; C:polysome; IDA:SGD.
GO:0003723; F:RNA binding; IDA:SGD.
GO:0002181; P:cytoplasmic translation; IPI:SGD.
2Q12034    447   SLF1_YEAST Protein SLF1 OS=Saccharomyces cere...4103e-46     171     33     52GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005844; C:polysome; IDA:SGD.
GO:0003723; F:RNA binding; IDA:SGD.
GO:0006878; P:cellular copper ion homeostasis; IPI:SGD.::GO:0006417; P:regulation of translation; IMP:SGD.
3Q659C4    914   LAR1B_HUMAN La-related protein 1B OS=Homo sap...730.00000000001     70.1     49     66
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
4Q6ZQ58    1072   LARP1_MOUSE La-related protein 1 OS=Mus muscu...610.00000000008     68.2     49     70
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
5Q6PKG0    1096   LARP1_HUMAN La-related protein 1 OS=Homo sapi...730.00000000008     67.8     45     66
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
6Q9P6K0    475   YLA3_SCHPO Uncharacterized HTH La-type RNA-bi...3150.0000000002     65.9     23     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0005844; C:polysome; ISS:PomBase.
GO:0003723; F:RNA binding; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.
7Q9VAW5    1673   LARP_DROME La-related protein OS=Drosophila m...590.00000001     60.8     42     73GO:0005829; C:cytosol; IDA:FlyBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000001; P:mitochondrion inheritance; IMP:FlyBase.::GO:0035071; P:salivary gland cell autophagic cell death; IEP:FlyBase.::GO:0007053; P:spindle assembly involved in male meiosis; IMP:FlyBase.::GO:0035186; P:syncytial blastoderm mitotic cell cycle; IMP:FlyBase.
8Q9I7T7    1531   Y1505_DROME La-related protein CG11505 OS=Dro...830.0000004     56.2     36     52
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
9P40796    390   LA_DROME La protein homolog OS=Drosophila mel...800.0000005     55.1     38     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0008098; F:5S rRNA primary transcript binding; IDA:FlyBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; NAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
10P28048    428   LAA_XENLA Lupus La protein homolog A OS=Xenop...590.00009     48.1     42     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
11P28049    427   LAB_XENLA Lupus La protein homolog B OS=Xenop...590.0001     47.8     41     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
12Q4G0J3    582   LARP7_HUMAN La-related protein 7 OS=Homo sapi...670.0002     47     33     61GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
13Q4R627    581   LARP7_MACFA La-related protein 7 OS=Macaca fa...670.0002     47     33     61GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
14P05455    408   LA_HUMAN Lupus La protein OS=Homo sapiens (Hu...580.0003     46.6     40     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; TAS:ProtInc.
GO:0003729; F:mRNA binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0000049; F:tRNA binding; TAS:ProtInc.
GO:0008334; P:histone mRNA metabolic process; TAS:ProtInc.::GO:0006400; P:tRNA modification; TAS:ProtInc.
15P10881    404   LA_BOVIN Lupus La protein homolog OS=Bos taur...580.0003     46.6     40     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
16Q05CL8    570   LARP7_MOUSE La-related protein 7 OS=Mus muscu...670.0005     45.8     31     61GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
17Q5XI01    571   LARP7_RAT La-related protein 7 OS=Rattus norv...670.0006     45.8     31     61GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
18P38656    415   LA_RAT Lupus La protein homolog OS=Rattus nor...640.0008     45.1     39     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008033; P:tRNA processing; IMP:RGD.
19Q26457    383   LA_AEDAL La protein homolog OS=Aedes albopict...560.0009     45.1     38     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
20Q8BWW4    719   LARP4_MOUSE La-related protein 4 OS=Mus muscu...580.001     45.1     34     60
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; ISS:UniProtKB.
21P32067    415   LA_MOUSE Lupus La protein homolog OS=Mus musc...580.001     44.7     40     60GO:0005634; C:nucleus; IDA:MGI.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI.
GO:0006396; P:RNA processing; IEA:InterPro.
22Q7ZWE3    555   LARP7_DANRE La-related protein 7 OS=Danio rer...630.001     44.7     29     67GO:0005634; C:nucleus; IEA:InterPro.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
23Q71RC2    724   LARP4_HUMAN La-related protein 4 OS=Homo sapi...580.002     44.3     34     59
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; IMP:UniProtKB.
24Q28G87    593   LARP7_XENTR La-related protein 7 OS=Xenopus t...630.003     43.5     30     65GO:0005634; C:nucleus; IEA:InterPro.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
25P33399    275   LHP1_YEAST La protein homolog OS=Saccharomyce...460.005     42.4     39     63GO:0005730; C:nucleolus; IDA:SGD.::GO:0005654; C:nucleoplasm; IDA:SGD.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0000049; F:tRNA binding; IDA:SGD.
GO:0008033; P:tRNA processing; IMP:SGD.
26Q6A0A2    741   LAR4B_MOUSE La-related protein 4B OS=Mus musc...600.017     41.2     28     55
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
27Q92615    738   LAR4B_HUMAN La-related protein 4B OS=Homo sap...600.019     41.2     28     55
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
28Q9BRS8    491   LARP6_HUMAN La-related protein 6 OS=Homo sapi...640.053     39.7     31     59GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.
29Q8BN59    492   LARP6_MOUSE La-related protein 6 OS=Mus muscu...500.12     38.5     32     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.
30P87058    298   LAH1_SCHPO La protein homolog OS=Schizosaccha...420.39     36.2     38     64GO:0005634; C:nucleus; IDA:PomBase.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0034307; P:regulation of ascospore formation; IMP:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IMP:PomBase.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:PomBase.::GO:0042779; P:tRNA 3'-trailer cleavage; IGI:PomBase.
31Q9P273    2699   TEN3_HUMAN Teneurin-3 OS=Homo sapiens (Human)...531.8     35     34     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0007165; P:signal transduction; IEA:InterPro.
records
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