Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR253W
Length:
121
Number of sequences:
5887
Description:
YBR253W SRB6 SGDID:S000000457, Chr II from 723270-723635, Genome Release 64-1-1, Verified ORF, "Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P32570    121   MED22_YEAST Mediator of RNA polymerase II tra...1212e-82     243     100     100GO:0070847; C:core mediator complex; IDA:SGD.::GO:0016592; C:mediator complex; IEA:InterPro.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:SGD.
2Q6FVV1    113   MED22_CANGA Mediator of RNA polymerase II tra...1192e-24     95.5     45     68GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
3Q74ZF1    121   MED22_ASHGO Mediator of RNA polymerase II tra...1216e-21     86.3     40     64GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
4Q6CQN6    121   MED22_KLULA Mediator of RNA polymerase II tra...1129e-19     80.9     45     65GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
5Q6C265    112   MED22_YARLI Mediator of RNA polymerase II tra...1180.00003     43.1     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q5A917    115   MED22_CANAL Mediator of RNA polymerase II tra...500.01     36.6     42     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q8E1A3    368   RLMN_STRA5 Ribosomal RNA large subunit methyl...556.3     29.6     31     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0070040; F:rRNA (adenine-C2-)-methyltransferase activity; IEA:EC.
8Q8E6Q7    368   RLMN_STRA3 Ribosomal RNA large subunit methyl...556.3     29.6     31     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0070040; F:rRNA (adenine-C2-)-methyltransferase activity; IEA:EC.
9Q3K2R2    368   RLMN_STRA1 Ribosomal RNA large subunit methyl...556.7     29.6     31     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0070040; F:rRNA (adenine-C2-)-methyltransferase activity; IEA:EC.
10Q8DVG8    361   RLMN_STRMU Ribosomal RNA large subunit methyl...557.7     29.6     31     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0070040; F:rRNA (adenine-C2-)-methyltransferase activity; IEA:EC.
11Q95JR4    293   CL070_MACFA Uncharacterized protein C12orf70 ...458     29.3     33     60GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
records
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