Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR234C
Length:
384
Number of sequences:
5887
Description:
YBR234C ARC40 SGDID:S000000438, Chr II from 686592-685438, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the ARP2/3 complex, which is required for the motility and integrity of cortical actin patches"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q5XFW8    322   SEC13_RAT Protein SEC13 homolog OS=Rattus nor...1240.016     40.4     26     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IDA:MGI.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
32A5E2R6    415   CIAO1_LODEL Probable cytosolic iron-sulfur pr...2100.002     43.9     24     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
33B4P7Q3    335   CIAO1_DROYA Probable cytosolic iron-sulfur pr...1310.002     43.5     25     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
34Q6P0D9    330   CIAO1_DANRE Probable cytosolic iron-sulfur pr...2040.002     43.5     21     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
35A8WGF4    1189   IF122_XENTR Intraflagellar transport protein ...1630.002     43.9     28     44GO:0005929; C:cilium; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
36P55735    322   SEC13_HUMAN Protein SEC13 homolog OS=Homo sap...1240.021     40     26     45GO:0005829; C:cytosol; TAS:Reactome.::GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.::GO:0012507; C:ER to Golgi transport vesicle membrane; TAS:Reactome.::GO:0031080; C:Nup107-160 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:Reactome.::GO:0048208; P:COPII vesicle coating; TAS:Reactome.::GO:0006886; P:intracellular protein transport; NAS:UniProtKB.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0043687; P:post-translational protein modification; TAS:Reactome.::GO:0018279; P:protein N-linked glycosylation via asparagine; TAS:Reactome.
37B3NQR5    335   CIAO1_DROER Probable cytosolic iron-sulfur pr...1860.003     42.7     24     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
38B4QFZ8    335   CIAO1_DROSI Probable cytosolic iron-sulfur pr...1310.004     42.7     24     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
39B4LJT7    331   CIAO1_DROVI Probable cytosolic iron-sulfur pr...1850.004     42.4     22     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
40B4HRQ6    335   CIAO1_DROSE Probable cytosolic iron-sulfur pr...1310.004     42.4     24     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
41Q7K1Y4    335   CIAO1_DROME Probable cytosolic iron-sulfur pr...1310.005     42.4     24     44
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
42A7TR10    1313   RTC1_VANPO Restriction of telomere capping pr...2380.008     42.4     23     37GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
43Q4P5F5    455   CIAO1_USTMA Probable cytosolic iron-sulfur pr...1990.008     41.6     23     42
44B4MY77    335   CIAO1_DROWI Probable cytosolic iron-sulfur pr...1340.011     41.2     23     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
45Q292E8    335   CIAO1_DROPS Probable cytosolic iron-sulfur pr...1340.011     41.2     23     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
46Q6CMA2    333   CIAO1_KLULA Probable cytosolic iron-sulfur pr...736.8     32.3     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
47B3MC74    335   CIAO1_DROAN Probable cytosolic iron-sulfur pr...1340.011     41.2     23     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
48B4GDM7    335   CIAO1_DROPE Probable cytosolic iron-sulfur pr...1340.012     40.8     23     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
49A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...1930.013     40.8     22     40
50B5X212    333   CIO1B_SALSA Probable cytosolic iron-sulfur pr...1425.8     32.7     23     39
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
51Q09715    614   TUP11_SCHPO Transcriptional repressor tup11 O...1220.014     41.2     28     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042393; F:histone binding; IDA:PomBase.::GO:0003714; F:transcription corepressor activity; IGI:PomBase.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0006342; P:chromatin silencing; TAS:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
52B4KTK4    331   CIAO1_DROMO Probable cytosolic iron-sulfur pr...1310.015     40.8     23     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
53B4JW81    331   CIAO1_DROGR Probable cytosolic iron-sulfur pr...1429.4     32     24     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
54Q9P2H3    777   IFT80_HUMAN Intraflagellar transport protein ...1660.017     40.8     26     44GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
55Q66HB3    777   IFT80_RAT Intraflagellar transport protein 80...1680.019     40.8     26     44GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
56Q8K057    777   IFT80_MOUSE Intraflagellar transport protein ...1680.021     40.8     26     44GO:0005813; C:centrosome; IDA:MGI.::GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
57Q3ZCC9    322   SEC13_BOVIN Protein SEC13 homolog OS=Bos taur...1240.024     40     26     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
58Q1DR81    473   CIAO1_COCIM Probable cytosolic iron-sulfur pr...1210.024     40.4     28     46
59Q55FJ2    766   WDR91_DICDI WD repeat-containing protein 91 h...2040.026     40.4     26     41
60P74442    1191   Y143_SYNY3 Uncharacterized WD repeat-containi...1650.027     40.4     24     43
61B3MJV8    419   WDR12_DROAN Ribosome biogenesis protein WDR12...3100.028     40     24     39GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
records
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