rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
571 | Q39244 | 250 | RU1A_ARATH U1 small nuclear ribonucleoprotein... | 76 | 0.15 | 38.1 | 29 | 51 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005685; C:U1 snRNP; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.::GO:0009651; P:response to salt stress; IGI:TAIR. | 572 | Q8BHN5 | 476 | RBM45_MOUSE RNA-binding protein 45 OS=Mus mus... | 92 | 2.6 | 34.7 | 28 | 50 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; ISS:UniProtKB. | 573 | Q09167 | 269 | SRSF5_RAT Serine/arginine-rich splicing facto... | 60 | 0.16 | 38.1 | 33 | 52 | GO:0016607; C:nuclear speck; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051726; P:regulation of cell cycle; IEP:RGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 574 | Q15434 | 407 | RBMS2_HUMAN RNA-binding motif, single-strande... | 65 | 7.2 | 33.5 | 28 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0006396; P:RNA processing; TAS:ProtInc. | 575 | Q13243 | 272 | SRSF5_HUMAN Serine/arginine-rich splicing fac... | 60 | 0.16 | 38.1 | 33 | 52 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0006376; P:mRNA splice site selection; TAS:ProtInc.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 576 | O81127 | 187 | RZP21_ARATH Serine/arginine-rich splicing fac... | 59 | 0.16 | 37.7 | 41 | 54 | GO:0016607; C:nuclear speck; IDA:TAIR. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:TAIR. | 577 | Q8SX83 | 5560 | SPEN_DROME Protein split ends OS=Drosophila m... | 73 | 0.17 | 39.3 | 29 | 53 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007411; P:axon guidance; IMP:UniProtKB.::GO:0007173; P:epidermal growth factor receptor signaling pathway; IMP:UniProtKB.::GO:0048106; P:establishment of thoracic bristle planar orientation; IMP:FlyBase.::GO:0007403; P:glial cell fate determination; IMP:UniProtKB.::GO:0008586; P:imaginal disc-derived wing vein morphogenesis; IMP:FlyBase.::GO:0035321; P:maintenance of imaginal disc-derived wing hair orientation; IMP:FlyBase.::GO:0007400; P:neuroblast fate determination; IMP:UniProtKB.::GO:0007422; P:peripheral nervous system development; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0007379; P:segment specification; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IMP:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB. | 578 | Q7T3I7 | 214 | RBM38_XENLA RNA-binding protein 38 OS=Xenopus... | 69 | 0.61 | 36.2 | 33 | 45 | GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 579 | P18615 | 380 | NELFE_HUMAN Negative elongation factor E OS=H... | 106 | 0.17 | 38.5 | 25 | 44 | GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 580 | O35326 | 270 | SRSF5_MOUSE Serine/arginine-rich splicing fac... | 60 | 0.17 | 38.1 | 33 | 52 | GO:0016607; C:nuclear speck; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 581 | P23246 | 707 | SFPQ_HUMAN Splicing factor, proline- and glut... | 68 | 0.17 | 38.9 | 34 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IDA:BHF-UCL.::GO:0042382; C:paraspeckles; IDA:BHF-UCL. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; IMP:BHF-UCL.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 582 | Q19706 | 256 | EIF3G_CAEEL Eukaryotic translation initiation... | 79 | 0.17 | 38.1 | 32 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase. | 583 | P30352 | 221 | SRSF2_CHICK Serine/arginine-rich splicing fac... | 77 | 0.21 | 37.7 | 35 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 584 | Q9UBK2 | 798 | PRGC1_HUMAN Peroxisome proliferator-activated... | 56 | 0.18 | 38.9 | 34 | 59 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; TAS:UniProtKB. | | | | | | | | | | GO:0050681; F:androgen receptor binding; NAS:UniProtKB.::GO:0003677; F:DNA binding; TAS:UniProtKB.::GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:UniProtKB.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IDA:BHF-UCL.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:UniProtKB.::GO:0001104; F:RNA polymerase II transcription cofactor activity; TAS:UniProtKB.::GO:0008134; F:transcription factor binding; TAS:UniProtKB. | | | | | | | | | | GO:0030521; P:androgen receptor signaling pathway; NAS:UniProtKB.::GO:0050873; P:brown fat cell differentiation; TAS:UniProtKB.::GO:0001678; P:cellular glucose homeostasis; NAS:UniProtKB.::GO:0007586; P:digestion; TAS:UniProtKB.::GO:0019395; P:fatty acid oxidation; NAS:UniProtKB.::GO:0006094; P:gluconeogenesis; NAS:UniProtKB.::GO:0007005; P:mitochondrion organization; NAS:UniProtKB.::GO:0006397; P:mRNA processing; TAS:UniProtKB.::GO:0070997; P:neuron death; IDA:UniProtKB.::GO:0046321; P:positive regulation of fatty acid oxidation; TAS:UniProtKB.::GO:0045722; P:positive regulation of gluconeogenesis; TAS:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; TAS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:BHF-UCL.::GO:0006461; P:protein complex assembly; TAS:UniProtKB.::GO:0050821; P:protein stabilization; TAS:UniProtKB.::GO:0014850; P:response to muscle activity; ISS:BHF-UCL.::GO:0042594; P:response to starvation; NAS:UniProtKB.::GO:0008380; P:RNA splicing; TAS:UniProtKB.::GO:0001659; P:temperature homeostasis; TAS:UniProtKB.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:UniProtKB. | 585 | O94359 | 116 | YHOC_SCHPO Uncharacterized RNA-binding protei... | 73 | 0.19 | 36.2 | 33 | 55 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 586 | Q5R1W5 | 221 | SRSF2_PANTR Serine/arginine-rich splicing fac... | 77 | 0.23 | 37.4 | 35 | 49 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 587 | P57052 | 281 | RBM11_HUMAN Putative RNA-binding protein 11 O... | 86 | 0.19 | 38.1 | 31 | 45 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 588 | Q804A9 | 289 | DAZL_CHICK Deleted in azoospermia-like OS=Gal... | 58 | 0.19 | 38.1 | 33 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW. | 589 | Q9UT83 | 609 | MUG28_SCHPO Meiotically up-regulated gene 28 ... | 84 | 0.19 | 38.5 | 30 | 50 | GO:0005619; C:ascospore wall; IDA:PomBase.::GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005628; C:prospore membrane; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031321; P:ascospore-type prospore assembly; IMP:PomBase.::GO:0007126; P:meiosis; IEA:UniProtKB-KW. | 590 | Q865B6 | 796 | PRGC1_PIG Peroxisome proliferator-activated r... | 56 | 0.2 | 38.5 | 34 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; ISS:AgBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB. | | | | | | | | | | GO:0070997; P:neuron death; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:AgBase.::GO:0010941; P:regulation of cell death; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 591 | Q9LVX1 | 908 | C3H41_ARATH Zinc finger CCCH domain-containin... | 92 | 0.2 | 38.5 | 32 | 53 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 592 | Q7QCB6 | 163 | NCBP2_ANOGA Nuclear cap-binding protein subun... | 77 | 0.2 | 37 | 30 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 593 | Q99069 | 142 | GRP1_SORBI Glycine-rich RNA-binding protein 1... | 59 | 0.21 | 36.6 | 39 | 53 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 594 | O94432 | 474 | YHKF_SCHPO Uncharacterized RNA-binding protei... | 81 | 0.22 | 38.1 | 30 | 49 | GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005849; C:mRNA cleavage factor complex; ISS:PomBase. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; NAS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase. | 595 | P51989 | 346 | RO21_XENLA Heterogeneous nuclear ribonucleopr... | 52 | 0.22 | 38.1 | 33 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 596 | Q9QYK2 | 796 | PRGC1_RAT Peroxisome proliferator-activated r... | 56 | 0.23 | 38.5 | 34 | 59 | GO:0005829; C:cytosol; IDA:RGD.::GO:0005634; C:nucleus; IDA:RGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007005; P:mitochondrion organization; IMP:RGD.::GO:0070997; P:neuron death; ISS:UniProtKB.::GO:0046321; P:positive regulation of fatty acid oxidation; IMP:RGD.::GO:0045722; P:positive regulation of gluconeogenesis; TAS:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 597 | Q865B7 | 796 | PRGC1_BOVIN Peroxisome proliferator-activated... | 56 | 0.23 | 38.5 | 34 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; ISS:AgBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0070997; P:neuron death; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:AgBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 598 | Q5AHI7 | 454 | NOP12_CANAL Nucleolar protein 12 OS=Candida a... | 89 | 0.23 | 38.1 | 28 | 49 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 599 | P48810 | 385 | RB87F_DROME Heterogeneous nuclear ribonucleop... | 87 | 0.43 | 37.4 | 29 | 46 | GO:0000785; C:chromatin; IDA:FlyBase.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0035062; C:omega speckle; IDA:FlyBase.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase.::GO:0030529; C:ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase. | | | | | | | | | | GO:0007067; P:mitosis; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 600 | P51992 | 385 | RO32_XENLA Heterogeneous nuclear ribonucleopr... | 61 | 0.77 | 36.6 | 41 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 601 | Q5ZML3 | 257 | SRSF1_CHICK Serine/arginine-rich splicing fac... | 74 | 0.24 | 37.7 | 27 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |