Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR195C
Length:
422
Number of sequences:
5887
Description:
YBR195C MSI1 SGDID:S000000399, Chr II from 611882-610614, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of chromatin assembly factor I (CAF-1), negative regulator of the RAS/cAMP pathway via sequestration of Npr1p kinase; localizes to the nucleus and cytoplasm; homologous to human retinoblastoma binding proteins RbAp48 and RbAp46"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q5RE95    330   WDR5B_PONAB WD repeat-containing protein 5B O...1400.97     35     26     38
632A7TNS8    669   CAF4_VANPO CCR4-associated factor 4 homolog O...615.4     33.1     28     54GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
633Q6FJZ9    427   PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS...1460.23     37.4     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
634B7FNU7    439   LIS1_PHATC Lissencephaly-1 homolog OS=Phaeoda...740.23     37.4     34     50GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
635B6HP56    458   LIS11_PENCW Nuclear distribution protein nudF...1770.4     36.6     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
636Q6GPC6    522   TB1RB_XENLA F-box-like/WD repeat-containing p...1810.24     37.4     24     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
637Q9UTN4    509   PFS2_SCHPO Polyadenylation factor subunit 2 O...1570.24     37.4     23     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:2000045; P:regulation of G1/S transition of mitotic cell cycle; IMP:PomBase.
638Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...1400.24     37.4     19     46GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
639Q90ZL4    410   LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus...2180.98     35.4     21     41GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
640Q7SZM9    519   TB1RA_XENLA F-box-like/WD repeat-containing p...1810.24     37.4     24     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
641Q0V8F1    915   CORO7_BOVIN Coronin-7 OS=Bos taurus (Bovine)....1570.33     37     25     44GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
642Q9R1A8    733   RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2...1630.25     37.4     24     48GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
643Q6L4F8    336   GBLPB_ORYSJ Guanine nucleotide-binding protei...1220.25     37     29     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
644B4PU14    499   WDR55_DROYA WD repeat-containing protein 55 h...1060.25     37.4     30     47
645Q6NZH4    410   LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus...2181.8     34.3     20     41GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
646Q3SXM0    396   DC4L1_HUMAN DDB1- and CUL4-associated factor ...1430.25     37     27     41
647Q2HJ56    500   PWP1_BOVIN Periodic tryptophan protein 1 homo...1652.8     33.9     22     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
648P53197    566   CDH1_YEAST APC/C activator protein CDH1 OS=Sa...2290.25     37.4     20     43GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0010997; F:anaphase-promoting complex binding; IDA:SGD.::GO:0030332; F:cyclin binding; IDA:SGD.::GO:0097027; F:ubiquitin-protein ligase activator activity; IDA:SGD.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; IMP:SGD.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010697; P:negative regulation of spindle pole body separation; IMP:SGD.::GO:2000600; P:positive regulation of cyclin catabolic process; IDA:SGD.::GO:2000060; P:positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0008361; P:regulation of cell size; IMP:SGD.
649B3P4F8    498   WDR55_DROER WD repeat-containing protein 55 h...1060.26     37.4     30     47
650Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...1670.26     37     22     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
651Q6FNU4    1281   SEC31_CANGA Protein transport protein SEC31 O...810.26     37.4     33     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
652Q5U2W5    800   TBL3_RAT Transducin beta-like protein 3 OS=Ra...2060.27     37.4     23     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
653Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...1170.27     37     24     40GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
654Q5R7W0    344   WIPI3_PONAB WD repeat domain phosphoinositide...1100.27     37     25     46
655Q8NHY2    731   RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2...1630.27     37.4     24     48GO:0005813; C:centrosome; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005925; C:focal adhesion; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.
656Q8C7V3    528   UTP15_MOUSE U3 small nucleolar RNA-associated...1170.69     35.8     25     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
657B4LQ21    411   LIS1_DROVI Lissencephaly-1 homolog OS=Drosoph...740.27     37     30     50GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
658Q95RJ9    700   EBI_DROME F-box-like/WD repeat-containing pro...1860.27     37.4     24     43GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0017053; C:transcriptional repressor complex; IGI:FlyBase.
GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0070491; F:repressing transcription factor binding; IPI:FlyBase.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0022416; P:chaeta development; IMP:FlyBase.::GO:0042676; P:compound eye cone cell fate commitment; TAS:FlyBase.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IPI:GOC.::GO:0007219; P:Notch signaling pathway; TAS:FlyBase.::GO:0042461; P:photoreceptor cell development; IMP:FlyBase.::GO:0031065; P:positive regulation of histone deacetylation; IDA:FlyBase.::GO:0045572; P:positive regulation of imaginal disc growth; IMP:FlyBase.::GO:0045747; P:positive regulation of Notch signaling pathway; IDA:FlyBase.::GO:0042058; P:regulation of epidermal growth factor receptor signaling pathway; IMP:UniProtKB.::GO:0030162; P:regulation of proteolysis; TAS:FlyBase.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.::GO:0035220; P:wing disc development; IMP:FlyBase.
659Q9QXE7    527   TBL1X_MOUSE F-box-like/WD repeat-containing p...2172.4     34.3     24     41GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0045444; P:fat cell differentiation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0043627; P:response to estrogen stimulus; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
660B4MY65    409   LIS1_DROWI Lissencephaly-1 homolog OS=Drosoph...740.3     37     30     50GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
661Q9C827    926   COB22_ARATH Coatomer subunit beta'-2 OS=Arabi...1210.3     37.4     24     46GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
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