Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR195C
Length:
422
Number of sequences:
5887
Description:
YBR195C MSI1 SGDID:S000000399, Chr II from 611882-610614, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of chromatin assembly factor I (CAF-1), negative regulator of the RAS/cAMP pathway via sequestration of Npr1p kinase; localizes to the nucleus and cytoplasm; homologous to human retinoblastoma binding proteins RbAp48 and RbAp46"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361Q291L9    411   LIS1_DROPS Lissencephaly-1 homolog OS=Drosoph...1670.01     41.6     20     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
362B4GAJ1    411   LIS1_DROPE Lissencephaly-1 homolog OS=Drosoph...1670.01     41.6     20     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
363A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...2370.01     41.6     22     44
364Q7ZUW6    344   WIPI3_DANRE WD repeat domain phosphoinositide...1100.011     41.2     25     49GO:0031090; C:organelle membrane; IBA:RefGenome.
GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; IBA:RefGenome.
GO:0006914; P:autophagy; IBA:RefGenome.::GO:0042594; P:response to starvation; IBA:RefGenome.
365B4P6P9    411   LIS1_DROYA Lissencephaly-1 homolog OS=Drosoph...1670.011     41.6     20     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
366B3NPW0    411   LIS1_DROER Lissencephaly-1 homolog OS=Drosoph...1670.011     41.6     20     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
367Q29RH4    351   THOC3_BOVIN THO complex subunit 3 OS=Bos taur...1960.011     41.2     21     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
368P87053    605   POF1_SCHPO F-box/WD repeat-containing protein...1190.5     36.2     29     46GO:0000152; C:nuclear ubiquitin ligase complex; ISS:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
GO:0030674; F:protein binding, bridging; IPI:PomBase.
GO:0071276; P:cellular response to cadmium ion; IEP:PomBase.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IPI:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.
369P0CS48    473   PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS...1626.9     32.7     21     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
370P0CS49    473   PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS...1626.4     32.7     21     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
371A0CH87    403   LIS12_PARTE Lissencephaly-1 homolog 2 OS=Para...880.4     36.6     28     50GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
372Q0ULF5    1256   SEC31_PHANO Protein transport protein SEC31 O...2090.4     37     25     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
373C5FWH1    461   LIS1_ARTOC Nuclear distribution protein PAC1 ...940.31     37     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
374Q96J01    351   THOC3_HUMAN THO complex subunit 3 OS=Homo sap...1960.012     41.2     21     43GO:0000346; C:transcription export complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
375Q4V8C4    328   WDR5B_RAT WD repeat-containing protein 5B OS=...1391     35     25     38
376Q5JTN6    314   WDR38_HUMAN WD repeat-containing protein 38 O...801.1     35     33     49
377Q8VE80    351   THOC3_MOUSE THO complex subunit 3 OS=Mus musc...1960.012     41.2     21     43
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
378O88879    1249   APAF_MOUSE Apoptotic protease-activating fact...2116.7     32.7     20     42GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0016505; F:apoptotic protease activator activity; IPI:MGI.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:MGI.
GO:0006952; P:defense response; IEA:InterPro.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; IGI:MGI.::GO:0030900; P:forebrain development; IMP:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.::GO:0051402; P:neuron apoptotic process; IGI:MGI.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
379Q803X4    445   DCA13_DANRE DDB1- and CUL4-associated factor ...2040.013     41.2     21     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
380Q3B7M6    659   NEDD1_BOVIN Protein NEDD1 OS=Bos taurus (Bovi...1630.013     41.6     28     47
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
381P62881    395   GBB5_MOUSE Guanine nucleotide-binding protein...2215.6     32.7     21     41GO:0005634; C:nucleus; IDA:MGI.::GO:0005886; C:plasma membrane; IDA:MGI.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IDA:MGI.
382P62882    353   GBB5_RAT Guanine nucleotide-binding protein s...2216.5     32.7     21     41GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:RGD.
383P21304    576   PWP1_YEAST Periodic tryptophan protein 1 OS=S...1850.014     41.2     26     46GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006364; P:rRNA processing; IMP:SGD.
384Q25189    317   GBLP_HYDVU Guanine nucleotide-binding protein...3310.014     40.8     22     39
385Q99973    2627   TEP1_HUMAN Telomerase protein component 1 OS=...1130.068     39.3     33     49GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:MGI.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005625; C:soluble fraction; ISS:UniProtKB.::GO:0005697; C:telomerase holoenzyme complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000722; P:telomere maintenance via recombination; IDA:UniProtKB.
386Q6FVJ1    1336   RTC1_CANGA Restriction of telomere capping pr...2053.2     33.9     20     40GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
387Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...1722.9     33.9     24     47GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
388Q93847    395   YZLL_CAEEL Uncharacterized WD repeat-containi...1290.016     40.8     25     47
389O14775    395   GBB5_HUMAN Guanine nucleotide-binding protein...2217.6     32.3     21     41GO:0005834; C:heterotrimeric G-protein complex; NAS:UniProtKB.
GO:0003924; F:GTPase activity; NAS:UniProtKB.::GO:0004871; F:signal transducer activity; NAS:UniProtKB.
390O14186    846   YDSB_SCHPO Uncharacterized WD repeat-containi...790.049     39.7     32     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0005778; C:peroxisomal membrane; NAS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
391C4R6H3    500   LIS1_PICPG Nuclear distribution protein PAC1 ...1300.34     37     22     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
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