Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR188C
Length:
140
Number of sequences:
5887
Description:
YBR188C NTC20 SGDID:S000000392, Chr II from 604107-603685, Genome Release 64-1-1, reverse complement, Verified ORF, "Member of the NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38302    140   NTC20_YEAST Pre-mRNA-splicing factor NTC20 OS...1403e-98     285     100     100GO:0000974; C:Prp19 complex; IDA:SGD.::GO:0071006; C:U2-type catalytic step 1 spliceosome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IGI:SGD.
2Q01903    352   SUBI_SYNY3 Sulfate-binding protein OS=Synecho...810.1     35.4     37     47GO:0030288; C:outer membrane-bounded periplasmic space; IEA:InterPro.
GO:0008271; F:secondary active sulfate transmembrane transporter activity; IEA:InterPro.::GO:0015419; F:sulfate transmembrane-transporting ATPase activity; IEA:InterPro.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
3Q6NSW5    357   FA45B_HUMAN Protein FAM45B OS=Homo sapiens (H...820.29     34.3     32     46
4Q8TCE6    357   FA45A_HUMAN Protein FAM45A OS=Homo sapiens (H...820.97     32.7     30     45
5P02651    391   APOA4_RAT Apolipoprotein A-IV OS=Rattus norve...621.2     32.3     32     60GO:0042627; C:chylomicron; IDA:RGD.::GO:0034364; C:high-density lipoprotein particle; IEA:UniProtKB-KW.
GO:0008289; F:lipid binding; IEA:InterPro.
GO:0006869; P:lipid transport; TAS:RGD.::GO:0042157; P:lipoprotein metabolic process; IEA:InterPro.::GO:0014012; P:peripheral nervous system axon regeneration; IEP:RGD.::GO:0032094; P:response to food; TAS:RGD.::GO:0034014; P:response to triglyceride; IEP:RGD.
6Q9D8N2    357   FA45A_MOUSE Protein FAM45A OS=Mus musculus (M...823.2     31.2     30     45
7B2V9E3    308   NADA_SULSY Quinolinate synthase A OS=Sulfurih...1265.9     30     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008987; F:quinolinate synthetase A activity; IEA:InterPro.::GO:0016765; F:transferase activity, transferring alkyl or aryl (other than methyl) groups; IEA:InterPro.
GO:0009435; P:NAD biosynthetic process; IEA:InterPro.
8Q1H1G1    434   TIG_METFK Trigger factor OS=Methylobacillus f...1326.9     30     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:InterPro.
9Q98PF7    282   Y766_MYCPU DegV domain-containing protein MYP...337.8     30     42     61
records
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