Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR175W
Length:
315
Number of sequences:
5887
Description:
YBR175W SWD3 SGDID:S000000379, Chr II from 582408-583355, Genome Release 64-1-1, Verified ORF, "Essential subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
781B4LS78    419   WDR12_DROVI Ribosome biogenesis protein WDR12...2200.001     44.3     24     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
782Q6C709    441   PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS...1790.001     44.3     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
783Q9FUY2    931   LEUNG_ARATH Transcriptional corepressor LEUNI...1460.002     43.1     23     48GO:0005634; C:nucleus; IDA:TAIR.
GO:0046982; F:protein heterodimerization activity; IPI:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009908; P:flower development; IMP:TAIR.::GO:0080001; P:mucilage extrusion from seed coat; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
784Q9FE91    419   C3H62_ARATH Zinc finger CCCH domain-containin...2630.001     43.9     22     42
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
785Q75AV4    449   PFS2_ASHGO Polyadenylation factor subunit 2 O...1380.002     43.1     27     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
786Q99973    2627   TEP1_HUMAN Telomerase protein component 1 OS=...720.16     37.7     31     49GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:MGI.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005625; C:soluble fraction; ISS:UniProtKB.::GO:0005697; C:telomerase holoenzyme complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000722; P:telomere maintenance via recombination; IDA:UniProtKB.
787A2R3Z3    657   MDV1_ASPNC Mitochondrial division protein 1 O...906.1     32.3     26     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
788O65418    777   APC4_ARATH Anaphase-promoting complex subunit...830.23     37     27     48GO:0005680; C:anaphase-promoting complex; IEA:InterPro.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IEA:InterPro.
789Q94A40    1216   COPA1_ARATH Coatomer subunit alpha-1 OS=Arabi...1170.77     35.4     20     50GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
790O08653    2629   TEP1_RAT Telomerase protein component 1 OS=Ra...1650.27     37     25     42GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
791Q3SZD4    432   WDR18_BOVIN WD repeat-containing protein 18 O...1331.5     34.3     26     42
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
792Q54SF9    941   MHCKD_DICDI Myosin heavy chain kinase D OS=Di...2450.08     38.5     21     40
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; ISS:dictyBase.
GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.
793B4KKN1    419   WDR12_DROMO Ribosome biogenesis protein WDR12...2210.001     43.9     24     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
794Q6LA54    933   YF48_SCHPO Uncharacterized WD repeat-containi...1480.001     43.9     29     46GO:0005789; C:endoplasmic reticulum membrane; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
795O94394    369   YQF1_SCHPO Uncharacterized WD repeat-containi...562.2     33.5     32     54GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
796Q8TEB1    546   DCA11_HUMAN DDB1- and CUL4-associated factor ...2280.001     43.9     24     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
797Q5R7H5    546   DCA11_PONAB DDB1- and CUL4-associated factor ...2280.001     43.9     24     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
798O74845    564   YCY9_SCHPO Uncharacterized WD repeat-containi...2541.3     34.3     22     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0070210; C:Rpd3L-Expanded complex; IDA:PomBase.::GO:0034967; C:Set3 complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0006342; P:chromatin silencing; ISS:PomBase.::GO:0016575; P:histone deacetylation; ISS:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:PomBase.
799A6R3K5    490   YTM1_AJECN Ribosome biogenesis protein YTM1 O...1340.001     43.9     31     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
800Q91ZN1    461   COR1A_RAT Coronin-1A OS=Rattus norvegicus (Ra...1620.001     43.5     26     45GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0030027; C:lamellipodium; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IBA:RefGenome.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030595; P:leukocyte chemotaxis; IBA:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; IBA:RefGenome.::GO:0001845; P:phagolysosome assembly; IBA:RefGenome.::GO:0050918; P:positive chemotaxis; IBA:RefGenome.::GO:0008360; P:regulation of cell shape; IBA:RefGenome.::GO:0030217; P:T cell differentiation; NAS:RGD.::GO:0032796; P:uropod organization; IBA:RefGenome.
801Q8IV35    697   WDR49_HUMAN WD repeat-containing protein 49 O...1910.001     43.9     25     44
802Q5E9I8    546   DCA11_BOVIN DDB1- and CUL4-associated factor ...2280.001     43.9     24     39
803P16371    730   GROU_DROME Protein groucho OS=Drosophila mela...1141.8     33.9     23     44GO:0005634; C:nucleus; TAS:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.
GO:0071906; F:CRD domain binding; IPI:UniProtKB.::GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0070491; F:repressing transcription factor binding; IGI:FlyBase.::GO:0001106; F:RNA polymerase II transcription corepressor activity; IGI:FlyBase.
GO:0007015; P:actin filament organization; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045879; P:negative regulation of smoothened signaling pathway; IMP:FlyBase.::GO:0007541; P:sex determination, primary response to X:A ratio; TAS:FlyBase.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
804Q54IY5    1276   GEMI5_DICDI Component of gems protein 5 OS=Di...980.001     43.9     30     53GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
805O94967    919   WDR47_HUMAN WD repeat-containing protein 47 O...1990.75     35.4     21     41
806A8XEN7    554   DCA11_CAEBR DDB1- and CUL4-associated factor ...1430.003     42.7     26     44
GO:0008340; P:determination of adult lifespan; ISS:UniProtKB.
807A4R2Q6    484   YTM1_MAGO7 Ribosome biogenesis protein YTM1 O...1184.8     32.7     26     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
808Q9H2Y7    1883   ZF106_HUMAN Zinc finger protein 106 homolog O...1263.1     33.5     21     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
809Q9P7I3    651   MDV1_SCHPO Mitochondrial division protein 1 O...1510.15     37.4     26     46GO:0030015; C:CCR4-NOT core complex; NAS:PomBase.::GO:0005741; C:mitochondrial outer membrane; ISS:PomBase.
GO:0051020; F:GTPase binding; NAS:PomBase.
GO:0000266; P:mitochondrial fission; ISS:PomBase.::GO:0000002; P:mitochondrial genome maintenance; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PomBase.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
810Q5BJ90    423   WDR12_XENTR Ribosome biogenesis protein wdr12...1846.4     32     24     43GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
811A7TMF9    453   YTM1_VANPO Ribosome biogenesis protein YTM1 O...1150.04     39.3     26     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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