Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR175W
Length:
315
Number of sequences:
5887
Description:
YBR175W SWD3 SGDID:S000000379, Chr II from 582408-583355, Genome Release 64-1-1, Verified ORF, "Essential subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751Q5RF99    368   RAEL1_PONAB mRNA export factor OS=Pongo abeli...800.0005     45.1     33     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
752P78406    368   RAE1L_HUMAN mRNA export factor OS=Homo sapien...800.0005     45.1     33     53GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005856; C:cytoskeleton; TAS:ProtInc.::GO:0005640; C:nuclear outer membrane; TAS:ProtInc.::GO:0005643; C:nuclear pore; TAS:ProtInc.
GO:0008017; F:microtubule binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:ProtInc.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
753Q4WEI5    436   HAT2_ASPFU Histone acetyltransferase type B s...2310.0005     45.1     21     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
754Q3SWS8    368   RAE1L_RAT mRNA export factor OS=Rattus norveg...800.001     43.9     31     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
755Q4R6D2    368   RAE1L_MACFA mRNA export factor OS=Macaca fasc...800.0005     45.1     33     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
756Q86HX1    1114   HIRA_DICDI Protein HIRA OS=Dictyostelium disc...1011.2     34.7     24     46GO:0005634; C:nucleus; ISS:dictyBase.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0003714; F:transcription corepressor activity; ISS:dictyBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
757Q92176    461   COR1A_BOVIN Coronin-1A OS=Bos taurus (Bovine)...1830.0005     45.1     26     44GO:0030864; C:cortical actin cytoskeleton; ISS:RefGenome.::GO:0030027; C:lamellipodium; ISS:RefGenome.::GO:0001891; C:phagocytic cup; ISS:RefGenome.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0030595; P:leukocyte chemotaxis; ISS:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; ISS:RefGenome.::GO:0001845; P:phagolysosome assembly; ISS:RefGenome.::GO:0050918; P:positive chemotaxis; ISS:RefGenome.::GO:0008360; P:regulation of cell shape; ISS:RefGenome.::GO:0032796; P:uropod organization; ISS:RefGenome.
758Q99LL5    501   PWP1_MOUSE Periodic tryptophan protein 1 homo...1210.0006     45.1     26     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
759P73594    326   Y1409_SYNY3 Uncharacterized WD repeat-contain...1231.2     34.3     24     50GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
760Q09406    534   A16L2_CAEEL Autophagic-related protein 16.2 O...2980.0006     45.1     21     41
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0071688; P:striated muscle myosin thick filament assembly; IMP:WormBase.
761A2RRU4    1276   SCAP_RAT Sterol regulatory element-binding pr...1820.0006     45.1     28     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005792; C:microsome; IDA:RGD.::GO:0043234; C:protein complex; IDA:RGD.
GO:0007568; P:aging; IEP:RGD.::GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
762Q6TNS2    368   PK1IP_DANRE p21-activated protein kinase-inte...1351.3     34.3     24     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
763B7QKS1    315   CIAO1_IXOSC Probable cytosolic iron-sulfur pr...2780.019     40     22     35
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
764Q8MYE8    425   PAAF1_DICDI Probable proteasomal ATPase-assoc...930.23     36.6     29     46GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
765P32479    840   HIR1_YEAST Protein HIR1 OS=Saccharomyces cere...1250.0007     45.1     28     45GO:0000775; C:chromosome, centromeric region; IDA:SGD.::GO:0000417; C:HIR complex; IDA:SGD.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:SGD.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006336; P:DNA replication-independent nucleosome assembly; IDA:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:SGD.
766Q9W5Z5    427   WSB1_TAKRU WD repeat and SOCS box-containing ...2390.001     43.9     22     37
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
767O00628    323   PEX7_HUMAN Peroxisomal targeting signal 2 rec...780.16     37     24     55GO:0005777; C:peroxisome; IDA:UniProtKB.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IDA:UniProtKB.
GO:0008611; P:ether lipid biosynthetic process; IMP:UniProtKB.::GO:0016558; P:protein import into peroxisome matrix; IMP:UniProtKB.
768Q6GQT6    1276   SCAP_MOUSE Sterol regulatory element-binding ...1810.0008     45.1     28     45GO:0005789; C:endoplasmic reticulum membrane; IDA:MGI.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0015485; F:cholesterol binding; TAS:MGI.::GO:0005515; F:protein binding; IPI:MGI.
GO:0008203; P:cholesterol metabolic process; IDA:MGI.::GO:0045540; P:regulation of cholesterol biosynthetic process; IMP:MGI.::GO:0042304; P:regulation of fatty acid biosynthetic process; IMP:MGI.::GO:0001666; P:response to hypoxia; IMP:MGI.::GO:0032868; P:response to insulin stimulus; IMP:MGI.
769Q32SG6    964   HIRA_MAIZE Protein HIRA OS=Zea mays (Maize). ...885.6     32.7     32     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
770Q8L4M1    367   DWA1_ARATH WD repeat-containing protein DWA1 ...770.0008     44.3     30     57GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0010267; P:production of ta-siRNAs involved in RNA interference; IMP:TAIR.::GO:0016567; P:protein ubiquitination; IMP:UniProtKB.
771P78972    488   SLP1_SCHPO WD repeat-containing protein slp1 ...1692.9     33.1     22     40GO:0032153; C:cell division site; IDA:PomBase.::GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0033597; C:mitotic checkpoint complex; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IGI:PomBase.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IGI:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IGI:PomBase.
772Q9NRL3    753   STRN4_HUMAN Striatin-4 OS=Homo sapiens (Human...2150.23     37     22     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; NAS:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
773P36037    715   DOA1_YEAST Protein DOA1 OS=Saccharomyces cere...1830.017     40.4     27     46GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006303; P:double-strand break repair via nonhomologous end joining; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
774Q9JJA4    423   WDR12_MOUSE Ribosome biogenesis protein WDR12...1318.4     32     26     50GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0007219; P:Notch signaling pathway; IPI:MGI.
775P0CS30    440   CIAO1_CRYNJ Probable cytosolic iron-sulfur pr...1710.0008     44.3     25     44
776P0CS31    440   CIAO1_CRYNB Probable cytosolic iron-sulfur pr...1710.0008     44.3     25     44
777P57737    925   CORO7_HUMAN Coronin-7 OS=Homo sapiens (Human)...2690.016     40.8     22     43GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
778Q9D0I6    474   WSDU1_MOUSE WD repeat, SAM and U-box domain-c...1102     33.9     25     43GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
779Q6NRH1    601   DCAF8_XENLA DDB1- and CUL4-associated factor ...930.0009     44.3     29     48
780Q28I90    604   DCAF8_XENTR DDB1- and CUL4-associated factor ...930.001     44.3     29     48
781B4LS78    419   WDR12_DROVI Ribosome biogenesis protein WDR12...2200.001     44.3     24     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
records
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