Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR175W
Length:
315
Number of sequences:
5887
Description:
YBR175W SWD3 SGDID:S000000379, Chr II from 582408-583355, Genome Release 64-1-1, Verified ORF, "Essential subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
691Q7ZY78    396   WDR4_XENLA tRNA (guanine-N(7)-)-methyltransfe...1920.0001     47     26     45GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
692Q8BU03    919   PWP2_MOUSE Periodic tryptophan protein 2 homo...1129.9     31.6     21     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
693Q6BVZ3    504   PFS2_DEBHA Polyadenylation factor subunit 2 O...2070.18     37     22     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
694Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...1220.025     39.7     29     46GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
695P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...2180.61     35.8     22     40GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
696A6QM06    1278   SCAP_BOVIN Sterol regulatory element-binding ...1820.0002     47     28     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
697P0CS32    341   EIF3I_CRYNJ Eukaryotic translation initiation...2500.21     36.6     18     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
698P0CS33    341   EIF3I_CRYNB Eukaryotic translation initiation...2500.21     36.6     18     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
699Q55FR9    1221   COPA_DICDI Coatomer subunit alpha OS=Dictyost...1210.001     44.3     25     50GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
700Q5NVD0    521   PRP4_PONAB U4/U6 small nuclear ribonucleoprot...2120.008     41.6     22     36GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
701Q40153    473   LE14B_LITER LEC14B protein OS=var. erythrorhi...2240.0002     46.6     24     42
702O43172    522   PRP4_HUMAN U4/U6 small nuclear ribonucleoprot...2120.008     41.2     22     36GO:0015030; C:Cajal body; IDA:BHF-UCL.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; NAS:UniProtKB.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:BHF-UCL.
703Q96U88    461   ATG18_NEUCR Autophagy-related protein 18 OS=1...1200.0002     46.6     32     53GO:0005829; C:cytosol; ISS:RefGenome.::GO:0000329; C:fungal-type vacuole membrane; ISS:RefGenome.::GO:0070772; C:PAS complex; ISS:RefGenome.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; ISS:RefGenome.
GO:0016236; P:macroautophagy; ISS:RefGenome.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
704Q54UI3    467   WDR4_DICDI tRNA (guanine-N(7)-)-methyltransfe...2640.0002     46.6     27     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
705P33750    489   DCA13_YEAST Protein SOF1 OS=Saccharomyces cer...1004.2     32.7     23     43GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
706A0AUS0    487   WSDU1_DANRE WD repeat, SAM and U-box domain-c...1620.85     35     26     39GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
707O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...1161.8     33.9     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
708P97499    2629   TEP1_MOUSE Telomerase protein component 1 OS=...2620.032     39.7     23     40GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IMP:UniProtKB.
709P27133    445   COROA_DICDI Coronin-A OS=Dictyostelium discoi...1450.0002     46.6     26     46GO:0042995; C:cell projection; IDA:dictyBase.::GO:0009986; C:cell surface; IEA:UniProtKB-SubCell.::GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051015; F:actin filament binding; IDA:dictyBase.
GO:0007015; P:actin filament organization; ISS:dictyBase.::GO:0006928; P:cellular component movement; IMP:dictyBase.::GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0006972; P:hyperosmotic response; IEP:dictyBase.::GO:0030835; P:negative regulation of actin filament depolymerization; IBA:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; ISS:dictyBase.::GO:0006909; P:phagocytosis; IEP:dictyBase.::GO:0009617; P:response to bacterium; IEP:dictyBase.
710Q96KV7    1748   WDR90_HUMAN WD repeat-containing protein 90 O...1100.16     37.7     25     45
711O35242    920   FAN_MOUSE Protein FAN OS=Mus musculus (Mouse)...1051.7     34.3     23     46
GO:0005123; F:death receptor binding; TAS:MGI.
712Q5MNU5    1279   SCAP_PIG Sterol regulatory element-binding pr...1820.0002     46.6     28     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
713Q9QXL2    1672   KI21A_MOUSE Kinesin-like protein KIF21A OS=Mu...1960.28     36.6     22     42GO:0030424; C:axon; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
714O13046    1127   WDHD1_XENLA WD repeat and HMG-box DNA-binding...1610.33     36.6     24     35GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
715Q6DIF4    607   WDR1_XENTR WD repeat-containing protein 1 OS=...656.8     32.3     28     48GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
716Q6PAX7    607   WDR1B_XENLA WD repeat-containing protein 1-B ...667.4     32     30     53GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
717Q42384    486   PRL1_ARATH Protein pleiotropic regulatory loc...2270.0002     46.2     24     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048825; P:cotyledon development; IMP:TAIR.::GO:0009870; P:defense response signaling pathway, resistance gene-dependent; IMP:TAIR.::GO:0010204; P:defense response signaling pathway, resistance gene-independent; IMP:TAIR.::GO:0042742; P:defense response to bacterium; IMP:TAIR.::GO:0050832; P:defense response to fungus; IMP:TAIR.::GO:0009755; P:hormone-mediated signaling pathway; IMP:TAIR.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0048366; P:leaf development; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:TAIR.::GO:0006508; P:proteolysis; IMP:TAIR.::GO:0009749; P:response to glucose stimulus; IMP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0010182; P:sugar mediated signaling pathway; IMP:TAIR.
718P90587    601   WD66_PHYPO 66 kDa stress protein OS=Physarum ...2802.9     33.5     22     38
719O54927    421   WSB1_MOUSE WD repeat and SOCS box-containing ...2510.0003     45.4     20     38
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
720A8QBF3    327   EIF3I_BRUMA Eukaryotic translation initiation...2012.9     33.1     21     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
721Q9DAW6    521   PRP4_MOUSE U4/U6 small nuclear ribonucleoprot...3100.002     43.1     22     35GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
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