Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR175W
Length:
315
Number of sequences:
5887
Description:
YBR175W SWD3 SGDID:S000000379, Chr II from 582408-583355, Genome Release 64-1-1, Verified ORF, "Essential subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
571Q8VE80    351   THOC3_MOUSE THO complex subunit 3 OS=Mus musc...2120.0002     46.2     22     38
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
572P49027    334   GBLPA_ORYSJ Guanine nucleotide-binding protei...1280.00003     48.5     28     46GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0050832; P:defense response to fungus; IMP:UniProtKB.::GO:0060267; P:positive regulation of respiratory burst; IMP:UniProtKB.
573Q54MP8    2200   Y5837_DICDI Bromodomain and WD repeat-contain...885.6     32.7     30     49
574Q7T2F6    423   WSB1_DANRE WD repeat and SOCS box-containing ...2370.15     37.4     20     37
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
575P53196    417   RPN14_YEAST 26S proteasome regulatory subunit...1220.003     42.7     25     50GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0070682; P:proteasome regulatory particle assembly; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
576Q9CAA0    920   COB21_ARATH Coatomer subunit beta'-1 OS=Arabi...809.8     31.6     25     51GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
577P0CS44    757   MDV1_CRYNJ Mitochondrial division protein 1 O...700.004     42.7     36     54GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
578P0CS45    757   MDV1_CRYNB Mitochondrial division protein 1 O...700.004     42.7     36     54GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
579Q9UKT8    454   FBXW2_HUMAN F-box/WD repeat-containing protei...1750.00008     47.8     26     45
GO:0004842; F:ubiquitin-protein ligase activity; TAS:ProtInc.
GO:0006508; P:proteolysis; TAS:ProtInc.
580P40968    455   PRP17_YEAST Pre-mRNA-processing factor 17 OS=...2030.038     39.3     23     39GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IGI:SGD.::GO:0000348; P:nuclear mRNA branch site recognition; IGI:SGD.
581Q58D00    454   FBXW2_BOVIN F-box/WD repeat-containing protei...1750.00008     47.8     26     45
582Q3SZK1    434   AAMP_BOVIN Angio-associated migratory cell pr...2210.00002     49.3     22     41GO:0009986; C:cell surface; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0045766; P:positive regulation of angiogenesis; NAS:UniProtKB.::GO:0010595; P:positive regulation of endothelial cell migration; IMP:UniProtKB.::GO:0014909; P:smooth muscle cell migration; ISS:UniProtKB.
583Q922B6    594   TRAF7_MOUSE E3 ubiquitin-protein ligase TRAF7...1310.000009     50.8     31     47GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000185; P:activation of MAPKKK activity; ISS:UniProtKB.::GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0042981; P:regulation of apoptotic process; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
584Q229Z6    634   POC1_TETTS POC1 centriolar protein homolog OS...2420.002     43.1     24     43GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.::GO:0051297; P:centrosome organization; IMP:UniProtKB.
585Q5FVB6    396   WDR4_XENTR tRNA (guanine-N(7)-)-methyltransfe...1750.000009     50.4     26     45GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
586P39706    426   SWD1_YEAST COMPASS component SWD1 OS=Saccharo...310.62     35.4     48     65GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
587A7THX0    706   MDV1_VANPO Mitochondrial division protein 1 O...2280.0002     46.6     26     40GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
588A6NE52    1622   K1875_HUMAN WD repeat-containing protein KIAA...920.00001     50.8     26     52
589Q9FNZ1    443   C3H63_ARATH Zinc finger CCCH domain-containin...2362.6     33.5     21     37
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
590Q6Q0C0    670   TRAF7_HUMAN E3 ubiquitin-protein ligase TRAF7...1310.00001     50.4     31     47GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0000151; C:ubiquitin ligase complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
GO:0000185; P:activation of MAPKKK activity; IDA:UniProtKB.::GO:0006915; P:apoptotic process; IDA:MGI.::GO:0043410; P:positive regulation of MAPK cascade; IDA:MGI.::GO:0042981; P:regulation of apoptotic process; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
591Q8N157    1196   AHI1_HUMAN Jouberin OS=Homo sapiens (Human). ...3190.00001     50.8     23     40GO:0005912; C:adherens junction; IDA:UniProtKB.::GO:0005911; C:cell-cell junction; IDA:UniProtKB.::GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.::GO:0036038; C:TCTN-B9D complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0035844; P:cloaca development; ISS:UniProtKB.::GO:0001947; P:heart looping; ISS:UniProtKB.::GO:0030902; P:hindbrain development; ISS:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0071599; P:otic vesicle development; ISS:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; ISS:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; ISS:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; ISS:UniProtKB.::GO:0050795; P:regulation of behavior; ISS:UniProtKB.::GO:0010842; P:retina layer formation; ISS:UniProtKB.::GO:0065001; P:specification of axis polarity; ISS:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; ISS:UniProtKB.::GO:0016192; P:vesicle-mediated transport; ISS:UniProtKB.
592Q7Z4S6    1674   KI21A_HUMAN Kinesin-like protein KIF21A OS=Ho...1960.94     35     22     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
593Q6GM65    799   PLAP_XENLA Phospholipase A-2-activating prote...950.39     36.2     29     48
GO:0005488; F:binding; IEA:InterPro.
594Q28DW0    333   CIAO1_XENTR Probable cytosolic iron-sulfur pr...1380.00002     49.7     27     49
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
595P87177    922   YB1C_SCHPO Uncharacterized WD repeat-containi...1258.5     32     22     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
596Q7ZVL2    779   WDR24_DANRE WD repeat-containing protein 24 O...1400.26     36.6     24     41
597Q6RI45    1802   BRWD3_HUMAN Bromodomain and WD repeat-contain...770.048     39.3     26     55
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.
598Q75C26    328   CIAO1_ASHGO Probable cytosolic iron-sulfur pr...1750.0007     44.3     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
599Q6FJS0    455   PFS2_CANGA Polyadenylation factor subunit 2 O...1150.12     37.7     24     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
600Q6CMA2    333   CIAO1_KLULA Probable cytosolic iron-sulfur pr...1860.00005     47.8     28     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
601O14301    595   YE85_SCHPO Uncharacterized WD repeat-containi...1600.92     35     24     42GO:0030479; C:actin cortical patch; ISS:PomBase.::GO:0032153; C:cell division site; IDA:PomBase.::GO:0051286; C:cell tip; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0030042; P:actin filament depolymerization; ISS:PomBase.
records
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