Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR175W
Length:
315
Number of sequences:
5887
Description:
YBR175W SWD3 SGDID:S000000379, Chr II from 582408-583355, Genome Release 64-1-1, Verified ORF, "Essential subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451D4AM37    663   SCONB_ARTBC Probable E3 ubiquitin ligase comp...680.031     39.7     26     54
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
452Q6P0D9    330   CIAO1_DANRE Probable cytosolic iron-sulfur pr...2080.13     37.4     24     39
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
453C5FP68    674   SCONB_ARTOC Probable E3 ubiquitin ligase comp...880.008     41.6     31     55
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
454A7RM20    321   EIF3I_NEMVE Eukaryotic translation initiation...840.0000002     55.1     32     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
455D4D8P3    663   SCONB_TRIVH Probable E3 ubiquitin ligase comp...680.032     39.7     26     54
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
456C5DF48    457   LIS1_LACTC Nuclear distribution protein PAC1 ...844.5     32.7     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
457A8WVX8    327   EIF3I_CAEBR Eukaryotic translation initiation...910.0000003     55.1     33     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
458P83774    317   GBLP_CANAL Guanine nucleotide-binding protein...1780.61     35     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:CGD.
GO:0007155; P:cell adhesion; IMP:CGD.::GO:0030448; P:hyphal growth; IMP:CGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.
459Q12417    451   PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...1650.005     42     24     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
460Q9JHB4    367   WDR31_MOUSE WD repeat-containing protein 31 O...1870.46     35.8     25     42
461O54929    404   WSB2_MOUSE WD repeat and SOCS box-containing ...2200.0000003     55.1     25     48
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
462Q0V8J1    406   WSB2_BOVIN WD repeat and SOCS box-containing ...738.8     31.6     30     48
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
463Q6FJ73    337   CIAO1_CANGA Probable cytosolic iron-sulfur pr...1322.5     33.5     32     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
464Q676U5    607   A16L1_HUMAN Autophagy-related protein 16-1 OS...2310.0000003     55.5     24     43GO:0005776; C:autophagic vacuole; ISS:UniProtKB.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000045; P:autophagic vacuole assembly; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
465Q7ZXZ2    515   UTP15_XENLA U3 small nucleolar RNA-associated...1242     33.9     22     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
466Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...2310.0000003     55.1     25     43GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
467Q4X1Y0    510   PFS2_ASPFU Polyadenylation factor subunit 2 O...1880.14     37.4     23     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
468Q91854    518   TRCB_XENLA Beta-TrCP OS=Xenopus laevis (Afric...1030.00003     49.3     27     53
GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
469A1CBP8    655   MDV1_ASPCL Mitochondrial division protein 1 O...860.058     38.9     24     53GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
470A8PWQ8    356   CIAO1_MALGO Probable cytosolic iron-sulfur pr...2140.0000004     54.7     25     41
471B5X212    333   CIO1B_SALSA Probable cytosolic iron-sulfur pr...1661.1     34.3     23     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
472Q5R8K2    431   CSTF1_PONAB Cleavage stimulation factor subun...2320.0000008     53.5     21     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
473Q29L19    326   EIF3I_DROPS Eukaryotic translation initiation...950.96     34.7     23     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
474B4GSH1    326   EIF3I_DROPE Eukaryotic translation initiation...950.96     34.7     23     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
475Q54S59    299   WDR61_DICDI WD repeat-containing protein 61 h...2260.008     41.2     23     37
476B4N0L0    322   EIF3I_DROWI Eukaryotic translation initiation...900.82     34.7     23     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
477O35142    905   COPB2_RAT Coatomer subunit beta' OS=Rattus no...2120.003     43.1     25     43GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005080; F:protein kinase C binding; IPI:RGD.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
478Q9UKB1    542   FBW1B_HUMAN F-box/WD repeat-containing protei...1396.1     32.3     25     41GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0005829; C:cytosol; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:UniProtKB.
GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0042753; P:positive regulation of circadian rhythm; ISS:UniProtKB.::GO:0045862; P:positive regulation of proteolysis; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006470; P:protein dephosphorylation; ISS:UniProtKB.::GO:0031648; P:protein destabilization; IMP:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
479Q09990    665   LIN23_CAEEL F-box/WD repeat-containing protei...2520.0002     47     23     41GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0005634; C:nucleus; IDA:WormBase.
GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0040015; P:negative regulation of multicellular organism growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048812; P:neuron projection morphogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
480Q0CJD8    654   MDV1_ASPTN Mitochondrial division protein 1 O...1610.007     41.6     20     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
481Q1HPW4    329   EIF3I_BOMMO Eukaryotic translation initiation...909.7     31.6     23     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
records
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