Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR175W
Length:
315
Number of sequences:
5887
Description:
YBR175W SWD3 SGDID:S000000379, Chr II from 582408-583355, Genome Release 64-1-1, Verified ORF, "Essential subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421B7FNU7    439   LIS1_PHATC Lissencephaly-1 homolog OS=Phaeoda...1330.00006     47.8     28     47GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
422Q6TMK6    340   GBB1_CRIGR Guanine nucleotide-binding protein...2090.0000001     56.2     28     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
423A7RWD2    327   CIAO1_NEMVE Probable cytosolic iron-sulfur pr...1250.017     40     26     46
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
424Q25189    317   GBLP_HYDVU Guanine nucleotide-binding protein...2390.022     39.7     24     39
425Q54PE0    922   PWP2_DICDI Periodic tryptophan protein 2 homo...750.006     42     29     52GO:0005829; C:cytosol; ISS:dictyBase.::GO:0005730; C:nucleolus; ISS:dictyBase.
GO:0030515; F:snoRNA binding; ISS:dictyBase.
GO:0006364; P:rRNA processing; ISS:dictyBase.
426Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...2040.002     43.1     21     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
427P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...2070.000003     51.6     27     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
428A1DDL6    658   MDV1_NEOFI Mitochondrial division protein 1 O...1860.27     36.6     20     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
429B4LUA5    322   EIF3I_DROVI Eukaryotic translation initiation...950.32     36.2     24     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
430Q4WVS4    658   MDV1_ASPFU Mitochondrial division protein 1 O...1060.34     36.2     22     50GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
431Q55DA2    333   CIAO1_DICDI Probable cytosolic iron-sulfur pr...1300.034     39.3     22     50
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
432Q9NSI6    2320   BRWD1_HUMAN Bromodomain and WD repeat-contain...1020.76     35.4     28     50GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
433Q05048    431   CSTF1_HUMAN Cleavage stimulation factor subun...1740.002     43.1     24     42GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0006379; P:mRNA cleavage; TAS:ProtInc.::GO:0006378; P:mRNA polyadenylation; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
434Q965S8    327   EIF3I_CAEEL Eukaryotic translation initiation...910.0000002     55.8     33     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
435Q5R5W8    340   GBB1_PONAB Guanine nucleotide-binding protein...2090.0000002     55.8     28     44
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
436P54311    340   GBB1_RAT Guanine nucleotide-binding protein G...2090.0000002     55.8     27     44GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0010659; P:cardiac muscle cell apoptotic process; IDA:MGI.::GO:0071456; P:cellular response to hypoxia; IDA:MGI.::GO:0007204; P:elevation of cytosolic calcium ion concentration; IMP:RGD.
437P62874    340   GBB1_MOUSE Guanine nucleotide-binding protein...2090.0000002     55.8     27     44GO:0005834; C:heterotrimeric G-protein complex; IPI:MGI.::GO:0001750; C:photoreceptor outer segment; IDA:MGI.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007200; P:activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger; IDA:MGI.::GO:0008283; P:cell proliferation; IDA:MGI.::GO:0060041; P:retina development in camera-type eye; IMP:MGI.::GO:0050909; P:sensory perception of taste; IDA:MGI.
438P62873    340   GBB1_HUMAN Guanine nucleotide-binding protein...2090.0000002     55.8     27     44GO:0005834; C:heterotrimeric G-protein complex; IDA:MGI.::GO:0005624; C:membrane fraction; ISS:BHF-UCL.
GO:0003924; F:GTPase activity; IDA:MGI.::GO:0051020; F:GTPase binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; ISS:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; ISS:BHF-UCL.::GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0071380; P:cellular response to prostaglandin E stimulus; ISS:BHF-UCL.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; TAS:ProtInc.::GO:0030168; P:platelet activation; TAS:Reactome.::GO:0007265; P:Ras protein signal transduction; TAS:ProtInc.::GO:0007268; P:synaptic transmission; TAS:Reactome.
439P62872    340   GBB1_CANFA Guanine nucleotide-binding protein...2090.0000002     55.8     27     44
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
440P62871    340   GBB1_BOVIN Guanine nucleotide-binding protein...2090.0000002     55.8     27     44GO:0005834; C:heterotrimeric G-protein complex; IDA:BHF-UCL.::GO:0005624; C:membrane fraction; IDA:BHF-UCL.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; IDA:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; IDA:BHF-UCL.::GO:0071380; P:cellular response to prostaglandin E stimulus; IDA:BHF-UCL.
441Q10051    492   PRP19_CAEEL Pre-mRNA-processing factor 19 hom...2400.062     38.5     21     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0040002; P:collagen and cuticulin-based cuticle development; IMP:WormBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
442Q8C7V3    528   UTP15_MOUSE U3 small nucleolar RNA-associated...2208.1     32     22     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
443O74184    314   WAT1_SCHPO WD repeat-containing protein wat1 ...1040.001     43.9     30     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.::GO:0031932; C:TORC2 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006397; P:mRNA processing; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
444E9Q349    535   WDR25_MOUSE WD repeat-containing protein 25 O...1050.79     35     27     41
445P93339    377   GBB_NICPL Guanine nucleotide-binding protein ...2284.3     32.7     21     39GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
446Q59WJ4    543   PFS2_CANAL Polyadenylation factor subunit 2 O...2391.4     34.3     18     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
447Q91WM3    475   U3IP2_MOUSE U3 small nucleolar RNA-interactin...2463.1     33.1     20     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
448Q5BJQ6    431   CSTF1_RAT Cleavage stimulation factor subunit...2020.002     42.7     23     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
449Q99LC2    431   CSTF1_MOUSE Cleavage stimulation factor subun...2020.002     42.7     23     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
450O74319    642   TAF73_SCHPO Transcription initiation factor T...1650.000007     51.2     25     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; TAS:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; IC:PomBase.
GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:PomBase.
451D4AM37    663   SCONB_ARTBC Probable E3 ubiquitin ligase comp...680.031     39.7     26     54
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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