Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR175W
Length:
315
Number of sequences:
5887
Description:
YBR175W SWD3 SGDID:S000000379, Chr II from 582408-583355, Genome Release 64-1-1, Verified ORF, "Essential subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361Q7ZV55    325   EIF3I_DANRE Eukaryotic translation initiation...916.8     32     25     48GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
362Q9UTN4    509   PFS2_SCHPO Polyadenylation factor subunit 2 O...1700.00000003     58.2     28     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:2000045; P:regulation of G1/S transition of mitotic cell cycle; IMP:PomBase.
363A7RHG8    416   WDR12_NEMVE Ribosome biogenesis protein WDR12...1352.6     33.5     24     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
364B0XFT7    328   EIF3I_CULQU Eukaryotic translation initiation...1780.2     36.6     19     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
365Q32PJ6    339   CIAO1_BOVIN Probable cytosolic iron-sulfur pr...2060.00000004     57.8     26     43GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
366P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...1570.00009     47.8     25     48
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
367Q5XGI5    314   WDR83_XENTR WD repeat domain-containing prote...1221.1     34.3     23     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
368P93563    377   GBB_SOLTU Guanine nucleotide-binding protein ...2335     32.3     21     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
369Q16K15    326   EIF3I_AEDAE Eukaryotic translation initiation...1710.57     35.4     18     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
370A4RDD7    341   EIF3I_MAGO7 Eukaryotic translation initiation...1940.037     38.9     21     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0043581; P:mycelium development; IEP:PAMGO_MGG.
371Q40687    380   GBB_ORYSJ Guanine nucleotide-binding protein ...1500.99     34.7     22     39
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IEP:Gramene.
372Q13347    325   EIF3I_HUMAN Eukaryotic translation initiation...910.13     37.4     29     51GO:0005829; C:cytosol; TAS:Reactome.::GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:UniProtKB.
373Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...3360.0000005     54.7     24     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
374Q5E966    325   EIF3I_BOVIN Eukaryotic translation initiation...910.13     37.4     29     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
375Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...1840.31     36.6     22     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
376Q5R7R2    325   EIF3I_PONAB Eukaryotic translation initiation...910.13     37.4     29     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
377B0BNA7    325   EIF3I_RAT Eukaryotic translation initiation f...910.14     37.4     29     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
378O95170    752   CDRT1_HUMAN CMT1A duplicated region transcrip...1360.00000005     57.8     29     46
379B5FZ19    325   EIF3I_TAEGU Eukaryotic translation initiation...1620.67     35     22     39GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
380Q9QZD9    325   EIF3I_MOUSE Eukaryotic translation initiation...910.13     37.4     29     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
381Q6FJZ9    427   PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS...1930.003     42.4     23     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
382Q5IH81    333   EIF3I_RABIT Eukaryotic translation initiation...2340.11     37.7     21     38GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
383B9WD30    489   LIS1_CANDC Nuclear distribution protein PAC1 ...980.0002     46.2     34     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
384Q8TED0    518   UTP15_HUMAN U3 small nucleolar RNA-associated...2240.00000005     57.4     25     43GO:0005737; C:cytoplasm; IDA:LIFEdb.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
385Q9NYS7    404   WSB2_HUMAN WD repeat and SOCS box-containing ...1360.00004     48.5     25     51
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
386Q921C3    2304   BRWD1_MOUSE Bromodomain and WD repeat-contain...1971.1     35     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0008360; P:regulation of cell shape; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
387A7EKM8    458   LIS1_SCLS1 Nuclear distribution protein PAC1 ...730.022     40     33     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
388C7Z6H2    448   LIS1_NECH7 Nuclear distribution protein PAC1 ...2500.0000006     54.3     22     35GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
389Q6BUA6    529   LIS1_DEBHA Nuclear distribution protein PAC1 ...373.2     33.1     41     62GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
390Q4R4I8    906   COPB2_MACFA Coatomer subunit beta' OS=Macaca ...1670.0006     45.1     25     46GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
391Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...3360.0000006     54.3     24     40GO:0005730; C:nucleolus; IDA:HPA.
records
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