Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR154C
Length:
215
Number of sequences:
5887
Description:
YBR154C RPB5 SGDID:S000000358, Chr II from 549009-548362, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III; contacts DNA and affects transactivation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P20434    215   RPAB1_YEAST DNA-directed RNA polymerases I, I...2151e-160     449     100     100GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.::GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006360; P:transcription from RNA polymerase I promoter; IMP:SGD.::GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD.
2Q6FQA6    215   RPAB1_CANGA DNA-directed RNA polymerases I, I...2151e-146     414     90     96GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
3Q757H7    215   RPAB1_ASHGO DNA-directed RNA polymerases I, I...2152e-143     406     87     95GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
4Q6CJ62    215   RPAB1_KLULA DNA-directed RNA polymerases I, I...2151e-138     394     85     93GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
5Q9P4B9    215   RPAB1_KLUMA DNA-directed RNA polymerases I, I...2151e-137     391     85     92GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
6Q6BIJ0    214   RPAB1_DEBHA DNA-directed RNA polymerases I, I...2131e-121     350     73     89GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:InterPro.
7Q6CA26    212   RPAB1_YARLI DNA-directed RNA polymerases I, I...2056e-99     293     65     81GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
8Q09191    210   RPAB1_SCHPO DNA-directed RNA polymerases I, I...2114e-82     250     57     77GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; IGI:PomBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; IGI:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0006360; P:transcription from RNA polymerase I promoter; IGI:PomBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IDA:PomBase.::GO:0006383; P:transcription from RNA polymerase III promoter; IGI:PomBase.
9Q9N5K2    211   RPAB1_CAEEL DNA-directed RNA polymerases I, I...2152e-58     189     45     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.
10B0BNE2    210   RPAB1_RAT DNA-directed RNA polymerases I, II,...2184e-58     188     44     66GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
11Q80UW8    210   RPAB1_MOUSE DNA-directed RNA polymerases I, I...2184e-58     188     44     66GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
12A8XGH1    211   RPAB1_CAEBR DNA-directed RNA polymerases I, I...2151e-57     187     45     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
13Q5R587    210   RPAB1_PONAB DNA-directed RNA polymerases I, I...2185e-57     186     43     66GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
14P19388    210   RPAB1_HUMAN DNA-directed RNA polymerases I, I...2188e-57     185     44     66GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
15Q2T9T3    210   RPAB1_BOVIN DNA-directed RNA polymerases I, I...2182e-55     181     43     65GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
16Q54EH2    197   RPAB1_DICDI DNA-directed RNA polymerases I, I...2117e-52     172     45     60GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:dictyBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:dictyBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:dictyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006383; P:transcription from RNA polymerase III promoter; ISS:dictyBase.
17P31815    82   RPOH_THECE DNA-directed RNA polymerase subuni...731e-16     76.6     51     74
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
18A1RWW7    80   RPOH_THEPD DNA-directed RNA polymerase subuni...730.00000000000001     70.5     48     66
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
19C6A1F8    82   RPOH_THESM DNA-directed RNA polymerase subuni...740.00000000000003     69.7     47     66
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
20Q58443    78   RPOH_METJA DNA-directed RNA polymerase subuni...730.00000000000004     69.3     47     66
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
21O27122    77   RPOH_METTH DNA-directed RNA polymerase subuni...710.00000000000005     68.9     45     66
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
22C5A210    82   RPOH_THEGJ DNA-directed RNA polymerase subuni...730.00000000000009     68.2     49     74
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
23A3DMP2    91   RPOH_STAMF DNA-directed RNA polymerase subuni...700.0000000000005     66.2     49     66
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
24Q9V116    82   RPOH_PYRAB DNA-directed RNA polymerase subuni...640.0000000000009     65.5     48     72
GO:0003677; F:DNA binding; IEA:HAMAP.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:HAMAP.
25Q12WS3    78   RPOH_METBU DNA-directed RNA polymerase subuni...690.0000000000009     65.1     41     67
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
26P11521    84   RPOH_SULAC DNA-directed RNA polymerase subuni...740.000000000001     65.1     43     66
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
27O28394    76   RPOH_ARCFU DNA-directed RNA polymerase subuni...730.000000000001     64.7     45     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
28Q976A3    84   RPOH_SULTO DNA-directed RNA polymerase subuni...740.000000000002     64.7     43     64
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
29Q2NEK1    77   RPOH_METST DNA-directed RNA polymerase subuni...720.000000000006     62.8     39     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
30O74019    82   RPOH_PYRHO DNA-directed RNA polymerase subuni...640.000000000009     62.4     45     72
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
31P41559    78   RPOH_METVS DNA-directed RNA polymerase subuni...720.00000000001     62.4     38     67
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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