Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR114W
Length:
790
Number of sequences:
5887
Description:
YBR114W RAD16 SGDID:S000000318, Chr II from 467248-469620, Genome Release 64-1-1, Verified ORF, "Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) during nucleotide excision repair; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421O19085    482   TRI10_PIG Tripartite motif-containing protein...470.17     38.9     36     53GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
422Q4WZJ6    418   RAD18_ASPFU Postreplication repair E3 ubiquit...450.17     38.9     33     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
423Q9R1A8    733   RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2...460.17     38.9     39     57GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
424Q8NG06    486   TRI58_HUMAN Tripartite motif-containing prote...450.17     38.9     38     47GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
425Q9UDY6    481   TRI10_HUMAN Tripartite motif-containing prote...470.18     38.9     36     47GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
426Q757D9    643   BRE1_ASHGO E3 ubiquitin-protein ligase BRE1 O...520.18     38.9     35     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
427Q5TM52    420   RNF39_MACMU RING finger protein 39 OS=Macaca ...810.18     38.9     26     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
428Q5BN31    494   TRIM5_SAIBB Tripartite motif-containing prote...480.18     38.9     31     52GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
429Q5D7I0    494   TRIM5_SAISC Tripartite motif-containing prote...480.19     38.9     31     52GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
430Q7VKV0    973   RAPA_HAEDU RNA polymerase-associated protein ...1670.19     38.9     23     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
431Q5FWL3    317   RNF41_XENLA E3 ubiquitin-protein ligase NRDP1...570.2     38.5     33     54
GO:0031386; F:protein tag; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006917; P:induction of apoptosis; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.
432Q28DS3    257   RN170_XENTR RING finger protein 170 OS=Xenopu...830.2     38.1     28     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
433Q6J6I9    1863   BRCA1_MACMU Breast cancer type 1 susceptibili...980.2     38.9     27     41GO:0031436; C:BRCA1-BARD1 complex; ISS:UniProtKB.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW.::GO:0045717; P:negative regulation of fatty acid biosynthetic process; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0085020; P:protein K6-linked ubiquitination; ISS:UniProtKB.
434A4SR75    955   RAPA_AERS4 RNA polymerase-associated protein ...1300.21     38.9     27     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
435Q99PJ2    551   TRIM8_MOUSE Probable E3 ubiquitin-protein lig...760.21     38.5     32     53
GO:0004842; F:ubiquitin-protein ligase activity; NAS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
436D3ZQG6    744   TRIM2_RAT Tripartite motif-containing protein...460.22     38.9     33     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043526; P:neuroprotection; IMP:UniProtKB.
437Q8HXW8    326   PEX10_MACFA Peroxisome biogenesis factor 10 O...450.22     38.1     36     47GO:0005779; C:integral to peroxisomal membrane; ISS:UniProtKB.
GO:0008022; F:protein C-terminus binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016558; P:protein import into peroxisome matrix; ISS:UniProtKB.
438Q9ESN6    744   TRIM2_MOUSE Tripartite motif-containing prote...460.22     38.9     33     57GO:0005737; C:cytoplasm; NAS:UniProtKB.
GO:0017022; F:myosin binding; NAS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
GO:0043526; P:neuroprotection; IMP:UniProtKB.
439A4IF63    744   TRIM2_BOVIN Tripartite motif-containing prote...460.22     38.9     33     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043526; P:neuroprotection; ISS:UniProtKB.
440Q9BZR9    551   TRIM8_HUMAN Probable E3 ubiquitin-protein lig...760.22     38.5     32     53GO:0005737; C:cytoplasm; IDA:HPA.::GO:0016605; C:PML body; IDA:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0042803; F:protein homodimerization activity; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
441F7H9X2    744   TRIM2_CALJA Tripartite motif-containing prote...460.23     38.9     33     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043526; P:neuroprotection; ISS:UniProtKB.
442Q9C040    744   TRIM2_HUMAN Tripartite motif-containing prote...460.23     38.5     33     57GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
GO:0043526; P:neuroprotection; ISS:UniProtKB.
443D2GXS7    744   TRIM2_AILME Tripartite motif-containing prote...460.23     38.5     33     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043526; P:neuroprotection; ISS:UniProtKB.
444Q5R7T5    317   RNF41_PONAB E3 ubiquitin-protein ligase NRDP1...570.23     38.1     33     53
GO:0031386; F:protein tag; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006917; P:induction of apoptosis; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.
445Q9H4P4    317   RNF41_HUMAN E3 ubiquitin-protein ligase NRDP1...570.23     38.1     33     53GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0031386; F:protein tag; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006917; P:induction of apoptosis; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:2000377; P:regulation of reactive oxygen species metabolic process; IMP:UniProtKB.
446Q8HXH0    718   LONF3_MACFA LON peptidase N-terminal domain a...760.23     38.5     36     49
GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
447Q496Y0    759   LONF3_HUMAN LON peptidase N-terminal domain a...760.24     38.5     36     49
GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
448Q8BH75    317   RNF41_MOUSE E3 ubiquitin-protein ligase NRDP1...570.24     38.1     33     53
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0031386; F:protein tag; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006917; P:induction of apoptosis; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.
449Q9TSW0    461   TRI15_PIG Tripartite motif-containing protein...480.24     38.5     31     52GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
450Q5A4N5    378   RAD18_CANAL Postreplication repair E3 ubiquit...710.24     38.1     28     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
451Q4ZPQ0    948   RAPA_PSEU2 RNA polymerase-associated protein ...2160.25     38.5     22     39
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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