Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR114W
Length:
790
Number of sequences:
5887
Description:
YBR114W RAD16 SGDID:S000000318, Chr II from 467248-469620, Genome Release 64-1-1, Verified ORF, "Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) during nucleotide excision repair; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181Q9UR24    973   RHP26_SCHPO DNA repair protein rhp26 OS=Schiz...1250.0000000000003     77.4     34     55GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
182Q7TPQ3    1674   SHPRH_MOUSE E3 ubiquitin-protein ligase SHPRH...2030.004     44.7     27     42GO:0000786; C:nucleosome; IEA:InterPro.::GO:0005634; C:nucleus; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
183Q7YQM4    2492   ATRX_PANTR Transcriptional regulator ATRX OS=...423.2     35     33     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
184Q06554    1556   IRC20_YEAST Uncharacterized ATP-dependent hel...2810.00000001     62.8     24     40GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045003; P:double-strand break repair via synthesis-dependent strand annealing; IMP:SGD.
185Q7YQM3    2492   ATRX_PONPY Transcriptional regulator ATRX OS=...423.5     35     33     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
186P46100    2492   ATRX_HUMAN Transcriptional regulator ATRX OS=...423.3     35     33     57GO:0005720; C:nuclear heterochromatin; TAS:ProtInc.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0070087; F:chromo shadow domain binding; IPI:BHF-UCL.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003678; F:DNA helicase activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006306; P:DNA methylation; TAS:ProtInc.::GO:0006310; P:DNA recombination; TAS:ProtInc.::GO:0006281; P:DNA repair; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:ProtInc.
187P32863    898   RAD54_YEAST DNA repair and recombination prot...1860.000000002     65.1     28     47GO:0005634; C:nucleus; IMP:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0015616; F:DNA translocase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; IDA:SGD.::GO:0032392; P:DNA geometric change; IDA:SGD.::GO:0045003; P:double-strand break repair via synthesis-dependent strand annealing; TAS:SGD.::GO:0030491; P:heteroduplex formation; IDA:SGD.::GO:0032079; P:positive regulation of endodeoxyribonuclease activity; IDA:SGD.::GO:0000722; P:telomere maintenance via recombination; IMP:SGD.
188Q9H4L7    1026   SMRCD_HUMAN SWI/SNF-related matrix-associated...3560.000000000000001     85.1     24     41GO:0000792; C:heterochromatin; ISS:UniProtKB.::GO:0016363; C:nuclear matrix; NAS:UniProtKB.::GO:0043596; C:nuclear replication fork; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006338; P:chromatin remodeling; NAS:UniProtKB.::GO:0051304; P:chromosome separation; IMP:UniProtKB.::GO:0070932; P:histone H3 deacetylation; IMP:UniProtKB.::GO:0070933; P:histone H4 deacetylation; IMP:UniProtKB.::GO:0009117; P:nucleotide metabolic process; NAS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0000018; P:regulation of DNA recombination; IEP:UniProtKB.
189P41410    852   RAD54_SCHPO DNA repair protein rhp54 OS=Schiz...2110.000000000000002     84     29     47GO:0005634; C:nucleus; IDA:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0015616; F:DNA translocase activity; ISS:PomBase.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0033170; F:protein-DNA loading ATPase activity; TAS:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0000724; P:double-strand break repair via homologous recombination; ISS:PomBase.::GO:0030491; P:heteroduplex formation; ISS:PomBase.::GO:0006311; P:meiotic gene conversion; IMP:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.
190Q9US25    1373   HRP1_SCHPO Chromodomain helicase hrp1 OS=Schi...1610.000000000000005     83.6     31     54GO:0000779; C:condensed chromosome, centromeric region; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; TAS:PomBase.::GO:0008094; F:DNA-dependent ATPase activity; IDA:PomBase.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0048096; P:chromatin-mediated maintenance of transcription; TAS:PomBase.::GO:0007076; P:mitotic chromosome condensation; IMP:PomBase.::GO:0035067; P:negative regulation of histone acetylation; IMP:PomBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0060303; P:regulation of nucleosome density; IMP:PomBase.::GO:0006369; P:termination of RNA polymerase II transcription; IMP:PomBase.
191Q7KU24    1883   CHD1_DROME Chromodomain-helicase-DNA-binding ...1320.000000000000007     83.2     35     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005705; C:polytene chromosome interband; IDA:FlyBase.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0035042; P:fertilization, exchange of chromosomal proteins; IMP:FlyBase.::GO:0007476; P:imaginal disc-derived wing morphogenesis; IMP:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
192Q9DG67    918   RA54B_CHICK DNA repair and recombination prot...1540.0000000000002     77.8     31     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
193Q5T890    712   RAD26_HUMAN Putative DNA repair and recombina...2540.000000000003     73.9     25     43GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
194Q9JIM3    699   RAD26_MOUSE Putative DNA repair and recombina...2530.000000000007     72.8     26     43GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
195Q9P793    1418   MIT1_SCHPO Chromatin remodeling factor mit1 O...1350.00000000000002     81.3     34     52GO:0005721; C:centromeric heterochromatin; IDA:PomBase.::GO:0031934; C:mating-type region heterochromatin; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016581; C:NuRD complex; IDA:PomBase.::GO:0033553; C:rDNA heterochromatin; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.::GO:0031933; C:telomeric heterochromatin; IDA:PomBase.
GO:0005524; F:ATP binding; IDA:PomBase.::GO:0016887; F:ATPase activity; IDA:PomBase.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0000183; P:chromatin silencing at rDNA; IMP:PomBase.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:PomBase.::GO:0016584; P:nucleosome positioning; IMP:PomBase.
196Q9GQN5    1311   ATRX_DROME Transcriptional regulator ATRX hom...4120.000000000007     73.2     23     41GO:0005722; C:beta-heterochromatin; IDA:FlyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:FlyBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0008347; P:glial cell migration; IMP:FlyBase.::GO:0070868; P:heterochromatin organization involved in chromatin silencing; IMP:FlyBase.::GO:0006917; P:induction of apoptosis; IMP:FlyBase.::GO:0046328; P:regulation of JNK cascade; IGI:FlyBase.
197O55764    606   172L_IIV6 Putative helicase 172L OS=Invertebr...3500.000000000003     73.9     21     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
198P40352    1085   RAD26_YEAST DNA repair and recombination prot...4190.0000000000002     77.8     26     38GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:SGD.
199Q5FWF4    1079   ZRAB3_HUMAN Zinc finger Ran-binding domain-co...1550.000000002     64.7     25     48GO:0005622; C:intracellular; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
200Q6NZP1    1069   ZRAB3_MOUSE Zinc finger Ran-binding domain-co...1550.000000002     64.7     24     48GO:0005622; C:intracellular; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
201B2ZFP3    807   SMAL1_DANRE SWI/SNF-related matrix-associated...1490.00000007     60.1     27     48GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB.
GO:0001525; P:angiogenesis; IMP:ZFIN.::GO:0051216; P:cartilage development; IMP:ZFIN.::GO:0022402; P:cell cycle process; IMP:ZFIN.::GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0048589; P:developmental growth; IMP:ZFIN.::GO:0010172; P:embryonic body morphogenesis; IMP:ZFIN.::GO:0030097; P:hemopoiesis; IMP:ZFIN.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
202Q9U7E0    1359   ATRX_CAEEL Transcriptional regulator ATRX hom...2490.0000006     57     24     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040025; P:vulval development; IMP:WormBase.
203Q4DCH3    1086   JBP2_TRYCC Bifunctional helicase and thymine ...2170.000000002     65.1     28     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; IEA:EC.
204Q96L91    3159   EP400_HUMAN E1A-binding protein p400 OS=Homo ...1720.00000006     60.5     28     50GO:0035267; C:NuA4 histone acetyltransferase complex; IDA:UniProtKB.::GO:0016607; C:nuclear speck; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0043968; P:histone H2A acetylation; IDA:UniProtKB.::GO:0043967; P:histone H4 acetylation; IDA:UniProtKB.
205Q9VMX6    755   SMAL1_DROME SWI/SNF-related matrix-associated...1170.000000006     63.2     31     47GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
206Q9NZC9    954   SMAL1_HUMAN SWI/SNF-related matrix-associated...2220.00000004     60.5     28     44GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; IMP:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; IMP:UniProtKB.
GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.
207B4F769    910   SMAL1_RAT SWI/SNF-related matrix-associated a...1250.00000001     62.8     30     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
208Q9TTA5    941   SMAL1_BOVIN SWI/SNF-related matrix-associated...1280.0000003     58.2     31     48GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
209Q99NG0    1466   ARIP4_MOUSE Helicase ARIP4 OS=Mus musculus (M...2710.000002     55.5     24     41GO:0005634; C:nucleus; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0019901; F:protein kinase binding; IPI:MGI.::GO:0003712; F:transcription cofactor activity; IDA:MGI.
210Q57X81    1077   JBP2_TRYB2 Bifunctional helicase and thymine ...1740.0000006     57     27     47GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; IMP:UniProtKB.
GO:0070580; P:base J metabolic process; IMP:UniProtKB.
211Q498E7    960   SMAL1_XENLA SWI/SNF-related matrix-associated...1250.000001     55.8     30     49GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
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