Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR112C
Length:
966
Number of sequences:
5887
Description:
YBR112C CYC8 SGDID:S000000316, Chr II from 465770-462870, Genome Release 64-1-1, reverse complement, Verified ORF, "General transcriptional co-repressor, acts together with Tup1p; also acts as part of a transcriptional co-activator complex that recruits the SWI/SNF and SAGA complexes to promoters; can form the prion [OCT+]"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181A2BUA8    173   YCF3_PROM5 Photosystem I assembly protein ycf...850.63     36.2     26     47GO:0042651; C:thylakoid membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
182Q80920    142   VE6_HPV48 Protein E6 OS=Human papillomavirus ...710.75     35.4     31     45GO:0044204; C:host cell nuclear matrix; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
183Q61371    824   IFT88_MOUSE Intraflagellar transport protein ...1150.75     37.4     23     48GO:0045177; C:apical part of cell; IDA:BHF-UCL.::GO:0005814; C:centriole; IDA:UniProtKB.::GO:0035085; C:cilium axoneme; IDA:BHF-UCL.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.::GO:0031512; C:motile primary cilium; IDA:BHF-UCL.::GO:0032391; C:photoreceptor connecting cilium; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.::GO:0060411; P:cardiac septum morphogenesis; IMP:MGI.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0007368; P:determination of left/right symmetry; IMP:MGI.::GO:0009953; P:dorsal/ventral pattern formation; IMP:MGI.::GO:0042733; P:embryonic digit morphogenesis; IMP:MGI.::GO:0048568; P:embryonic organ development; IMP:MGI.::GO:0048853; P:forebrain morphogenesis; IMP:MGI.::GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0060426; P:lung vasculature development; IMP:MGI.::GO:0045862; P:positive regulation of proteolysis; IMP:MGI.::GO:0016485; P:protein processing; IMP:MGI.::GO:0042487; P:regulation of odontogenesis of dentin-containing tooth; IMP:MGI.::GO:0007224; P:smoothened signaling pathway; IMP:MGI.::GO:0021537; P:telencephalon development; IMP:MGI.
184Q8WXI7    22152   MUC16_HUMAN Mucin-16 OS=Homo sapiens (Human)....2730.79     37.4     22     40GO:0005615; C:extracellular space; IEA:UniProtKB-SubCell.::GO:0019898; C:extrinsic to membrane; IDA:UniProtKB.::GO:0005796; C:Golgi lumen; TAS:Reactome.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007155; P:cell adhesion; NAS:UniProtKB.::GO:0016266; P:O-glycan processing; TAS:Reactome.::GO:0043687; P:post-translational protein modification; TAS:Reactome.
185Q7Z7B0    1213   FLIP1_HUMAN Filamin-A-interacting protein 1 O...850.79     37.4     33     51
186A1Z8E9    486   BBS4_DROME Bardet-Biedl syndrome 4 protein ho...1304.6     34.7     22     42GO:0060170; C:cilium membrane; IEA:UniProtKB-SubCell.::GO:0000242; C:pericentriolar material; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.::GO:0003777; F:microtubule motor activity; ISS:UniProtKB.
GO:0051297; P:centrosome organization; ISS:UniProtKB.::GO:0042384; P:cilium assembly; IEP:FlyBase.
187A2CD21    173   YCF3_PROM3 Photosystem I assembly protein ycf...951     35.8     23     49GO:0042651; C:thylakoid membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
188Q4G394    171   YCF3_EMIHU Photosystem I assembly protein ycf...1111     35.4     30     50GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
189P31948    543   STIP1_HUMAN Stress-induced-phosphoprotein 1 O...981.1     36.6     24     48GO:0005794; C:Golgi apparatus; TAS:ProtInc.::GO:0005634; C:nucleus; TAS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007411; P:axon guidance; TAS:Reactome.::GO:0006950; P:response to stress; TAS:ProtInc.
190Q7V4G0    173   YCF3_PROMM Photosystem I assembly protein ycf...951.1     35.4     23     49GO:0042651; C:thylakoid membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
191Q95LZ5    872   TTC16_MACFA Tetratricopeptide repeat protein ...991.2     36.6     32     43
GO:0005488; F:binding; IEA:InterPro.
192Q4R8N7    543   STIP1_MACFA Stress-induced-phosphoprotein 1 O...981.2     36.6     24     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
193Q9LEM8    1385   NAC2_CHLRE PsbD mRNA maturation factor Nac2, ...531.2     37     34     57GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
194P0CI65    1303   NPHP3_DANRE Nephrocystin-3 OS=Danio rerio (Ze...1331.2     36.6     29     44GO:0072372; C:primary cilium; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
195Q9VGU5    872   TTC14_DROME Tetratricopeptide repeat protein ...1031.3     36.6     27     45
GO:0005488; F:binding; IEA:InterPro.
196Q7VE59    173   YCF3_PROMA Photosystem I assembly protein ycf...851.4     35     26     45GO:0042651; C:thylakoid membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
197Q05022    1729   RRP5_YEAST rRNA biogenesis protein RRP5 OS=Sa...1671.4     36.6     23     46GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0008266; F:poly(U) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000464; P:endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
198Q12309    687   CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=S...1391.4     36.6     25     43GO:0000785; C:chromatin; IDA:SGD.::GO:0000974; C:Prp19 complex; IDA:SGD.::GO:0071006; C:U2-type catalytic step 1 spliceosome; IDA:SGD.::GO:0071007; C:U2-type catalytic step 2 spliceosome; IDA:SGD.::GO:0071008; C:U2-type post-mRNA release spliceosomal complex; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003688; F:DNA replication origin binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000354; P:cis assembly of pre-catalytic spliceosome; IMP:SGD.::GO:0006270; P:DNA-dependent DNA replication initiation; IMP:SGD.
199Q54MD1    641   PEX5_DICDI Peroxisomal targeting signal 1 rec...775.8     34.3     29     52GO:0005829; C:cytosol; IBA:RefGenome.::GO:0005778; C:peroxisomal membrane; IBA:RefGenome.
GO:0005052; F:peroxisome matrix targeting signal-1 binding; IBA:RefGenome.
GO:0016558; P:protein import into peroxisome matrix; IBA:RefGenome.
200Q2KIK0    338   SUGT1_BOVIN Suppressor of G2 allele of SKP1 h...841.5     35.8     27     48
GO:0005488; F:binding; IEA:InterPro.
201A5GQJ6    173   YCF3_SYNR3 Photosystem I assembly protein ycf...951.7     35     29     49GO:0042651; C:thylakoid membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
202P45400    381   CYCH_RHIME Cytochrome c-type biogenesis prote...1151.8     35.8     31     44GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0017004; P:cytochrome complex assembly; IEA:UniProtKB-KW.
203Q7U435    173   YCF3_SYNPX Photosystem I assembly protein ycf...841.9     34.7     24     46GO:0042651; C:thylakoid membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
204Q14690    1871   RRP5_HUMAN Protein RRP5 homolog OS=Homo sapie...992     36.2     25     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.
GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
205Q0I6Y9    173   YCF3_SYNS3 Photosystem I assembly protein ycf...952.1     34.7     24     48GO:0042651; C:thylakoid membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
206Q6FW76    695   CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=N...882.2     35.8     31     45GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
207Q5PR66    557   TTC26_DANRE Tetratricopeptide repeat protein ...1672.7     35.4     22     48
GO:0005488; F:binding; IEA:InterPro.
208Q85FT1    158   YCF3_CYAME Photosystem I assembly protein ycf...1162.8     34.3     26     46GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
209Q9D6K7    262   TTC33_MOUSE Tetratricopeptide repeat protein ...862.9     34.7     31     45
GO:0005488; F:binding; IEA:InterPro.
210Q26768    243   AGI6_TRYBB I/6 autoantigen OS=Trypanosoma bru...573     34.7     35     68GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005509; F:calcium ion binding; IEA:InterPro.
211Q1MTN9    544   RLF2_SCHPO Chromatin assembly factor 1 subuni...1683     35.4     21     50GO:0033186; C:CAF-1 complex; IDA:PomBase.::GO:0016585; C:chromatin remodeling complex; NAS:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0006338; P:chromatin remodeling; NAS:PomBase.::GO:0006335; P:DNA replication-dependent nucleosome assembly; IC:PomBase.::GO:0070829; P:heterochromatin maintenance; IMP:PomBase.::GO:0035067; P:negative regulation of histone acetylation; IMP:PomBase.::GO:0090053; P:positive regulation of chromatin silencing at centromere; IMP:PomBase.::GO:0090055; P:positive regulation of chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0051574; P:positive regulation of histone H3-K9 methylation; IMP:PomBase.::GO:0034504; P:protein localization to nucleus; IGI:PomBase.
records
Previous ‹‹ ›› Next Total records: 238 181 - 210
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::