Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR098W
Length:
691
Number of sequences:
5887
Description:
YBR098W MMS4 SGDID:S000000302, Chr II from 441515-443590, Genome Release 64-1-1, Verified ORF, "Subunit of the structure-specific Mms4p-Mus81p endonuclease that cleaves branched DNA; involved in recombination, DNA repair, and joint molecule formation/resolution during meiotic recombination"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38257    691   MMS4_YEAST Crossover junction endonuclease MM...6910     1425     100     100GO:0048476; C:Holliday junction resolvase complex; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008821; F:crossover junction endodeoxyribonuclease activity; IDA:SGD.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003713; F:transcription coactivator activity; IDA:SGD.
GO:0006281; P:DNA repair; IMP:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.::GO:0010520; P:regulation of reciprocal meiotic recombination; IGI:SGD.
2Q6FM02    580   EME1_CANGA Crossover junction endonuclease EM...3961e-110     353     44     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.
3Q75B88    714   EME1_ASHGO Crossover junction endonuclease EM...3482e-62     226     34     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.
4Q6CNM6    690   EME1_KLULA Crossover junction endonuclease EM...3202e-49     188     32     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.
5Q820U3    246   TRMD_ENTFA tRNA (guanine-N(1)-)-methyltransfe...1063.2     34.3     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0052906; F:tRNA (guanine(37)-N(1))-methyltransferase activity; IEA:EC.
6Q96PD5    576   PGRP2_HUMAN N-acetylmuramoyl-L-alanine amidas...1184.8     34.3     24     43GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0005622; C:intracellular; NAS:UniProtKB.::GO:0016020; C:membrane; NAS:UniProtKB.
GO:0008745; F:N-acetylmuramoyl-L-alanine amidase activity; TAS:UniProtKB.::GO:0042834; F:peptidoglycan binding; IDA:UniProtKB.::GO:0016019; F:peptidoglycan receptor activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0050830; P:defense response to Gram-positive bacterium; IDA:UniProtKB.::GO:0016045; P:detection of bacterium; IDA:UniProtKB.::GO:0045087; P:innate immune response; NAS:UniProtKB.::GO:0001519; P:peptide amidation; NAS:UniProtKB.::GO:0009253; P:peptidoglycan catabolic process; IEA:InterPro.
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