Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR089C-A
Length:
99
Number of sequences:
5887
Description:
YBR089C-A NHP6B SGDID:S000002157, Chr II from 426489-426190, Genome Release 64-1-1, reverse complement, Verified ORF, "High-mobility group (HMG) protein that binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; homologous to mammalian HMGB1 and HMGB2"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421B2JYQ7    1485   MUKB_YERPB Chromosome partition protein MukB ...923.2     30     27     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0009295; C:nucleoid; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.
422P0CB47    393   UBFL1_HUMAN Putative upstream-binding factor ...833.2     30     25     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
423Q10241    223   CMB1_SCHPO Mismatch-binding protein cmb1 OS=S...803.3     29.6     26     50GO:0005739; C:mitochondrion; IDA:PomBase.::GO:0005634; C:nucleus; NAS:PomBase.
GO:0003684; F:damaged DNA binding; IDA:PomBase.
GO:0006281; P:DNA repair; TAS:PomBase.
424Q9Z1J1    584   TF7L1_MOUSE Transcription factor 7-like 1 OS=...493.4     30     33     53GO:0005667; C:transcription factor complex; IBA:RefGenome.
GO:0008013; F:beta-catenin binding; IPI:MGI.::GO:0003682; F:chromatin binding; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IBA:RefGenome.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IBA:RefGenome.
GO:0008595; P:anterior/posterior axis specification, embryo; IMP:MGI.::GO:0048319; P:axial mesoderm morphogenesis; IMP:MGI.::GO:0007420; P:brain development; IBA:RefGenome.::GO:0060070; P:canonical Wnt receptor signaling pathway; IBA:RefGenome.::GO:0048699; P:generation of neurons; IBA:RefGenome.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:MGI.::GO:0046022; P:positive regulation of transcription from RNA polymerase II promoter during mitosis; IDA:MGI.::GO:2000036; P:regulation of stem cell maintenance; IMP:MGI.::GO:0043588; P:skin development; IGI:MGI.::GO:0035019; P:somatic stem cell maintenance; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
425O55062    57   SRY_APOFL Sex-determining region Y protein OS...513.6     28.1     29     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
426Q73Q16    646   DNAK_TREDE Chaperone protein DnaK OS=Treponem...483.6     29.6     35     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
427P86687    288   HUGA_POLPI Hyaluronidase OS=wasp). GN= ...573.7     29.6     32     51GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0004415; F:hyalurononglucosaminidase activity; IEA:EC.
GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.::GO:0006952; P:defense response; IEA:InterPro.
428P54277    932   PMS1_HUMAN PMS1 protein homolog 1 OS=Homo sap...633.7     29.6     37     51GO:0032389; C:MutLalpha complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0016887; F:ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0006298; P:mismatch repair; IBA:RefGenome.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.
429Q9U6V9    367   HUGA_POLAN Hyaluronidase OS=Polistes annulari...573.9     29.6     32     51
GO:0004415; F:hyalurononglucosaminidase activity; IEA:EC.
GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.::GO:0006952; P:defense response; IEA:InterPro.
430P0DB35    632   MNMG_STRPQ tRNA uridine 5-carboxymethylaminom...394     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
431Q48QN0    632   MNMG_STRPM tRNA uridine 5-carboxymethylaminom...394     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
432A2RH03    632   MNMG_STRPG tRNA uridine 5-carboxymethylaminom...394     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
433Q1J457    632   MNMG_STRPF tRNA uridine 5-carboxymethylaminom...394     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
434Q1JJD7    632   MNMG_STRPC tRNA uridine 5-carboxymethylaminom...394     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
435Q1J990    632   MNMG_STRPB tRNA uridine 5-carboxymethylaminom...394     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
436Q5X9C2    632   MNMG_STRP6 tRNA uridine 5-carboxymethylaminom...394     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
437P0DB34    632   MNMG_STRP3 tRNA uridine 5-carboxymethylaminom...394     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
438Q1JED6    632   MNMG_STRPD tRNA uridine 5-carboxymethylaminom...394     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
439Q8NZ02    632   MNMG_STRP8 tRNA uridine 5-carboxymethylaminom...394     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
440Q99XI8    632   MNMG_STRP1 tRNA uridine 5-carboxymethylaminom...394.1     29.6     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
441P40653    72   MG44_TARMA SRY-related protein MG44 OS=Tarent...534.1     28.5     26     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
442Q54GW3    247   CC124_DICDI Coiled-coil domain-containing pro...444.7     29.3     30     57
443Q46IB4    656   MNMG_PROMT tRNA uridine 5-carboxymethylaminom...844.8     29.3     32     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
444Q6WRX6    181   MATMC_SCHKA Mating-type M-specific polypeptid...524.9     29.3     27     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
445B4J3A3    429   MAEL_DROGR Protein maelstrom OS=Drosophila gr...565.5     29.3     30     54GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0043186; C:P granule; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0031047; P:gene silencing by RNA; ISS:UniProtKB.::GO:0030718; P:germ-line stem cell maintenance; ISS:UniProtKB.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0034587; P:piRNA metabolic process; ISS:UniProtKB.::GO:0060964; P:regulation of gene silencing by miRNA; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
446O75717    1129   WDHD1_HUMAN WD repeat and HMG-box DNA-binding...697.3     28.9     29     52GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005654; C:nucleoplasm; TAS:ProtInc.
GO:0003677; F:DNA binding; TAS:ProtInc.
447P40669    54   CH07_CHICK SRY-related protein CH7 OS=Gallus ...347.5     27.3     35     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
448Q6DD17    217   C124B_XENLA Coiled-coil domain-containing pro...388.2     28.5     26     58
records
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