Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR089C-A
Length:
99
Number of sequences:
5887
Description:
YBR089C-A NHP6B SGDID:S000002157, Chr II from 426489-426190, Genome Release 64-1-1, reverse complement, Verified ORF, "High-mobility group (HMG) protein that binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; homologous to mammalian HMGB1 and HMGB2"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271P54231    320   SOX2_SHEEP Transcription factor SOX-2 OS=Ovis...610.006     37.7     31     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0044212; F:transcription regulatory region DNA binding; ISS:BHF-UCL.
GO:0045665; P:negative regulation of neuron differentiation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0097150; P:neuronal stem cell maintenance; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
272Q32PP9    238   SOX14_DANRE Transcription factor Sox-14 OS=Da...670.006     37.7     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0021854; P:hypothalamus development; IMP:ZFIN.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
273Q9Y651    276   SOX21_HUMAN Transcription factor SOX-21 OS=Ho...540.006     37.7     33     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; ISS:UniProtKB.::GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; NAS:UniProtKB.
GO:0048863; P:stem cell differentiation; IDA:UniProtKB.
274Q9UJU2    399   LEF1_HUMAN Lymphoid enhancer-binding factor 1...690.007     37.7     32     57GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0032993; C:protein-DNA complex; IDA:BHF-UCL.::GO:0005667; C:transcription factor complex; IDA:BHF-UCL.
GO:0070016; F:armadillo repeat domain binding; IPI:BHF-UCL.::GO:0008013; F:beta-catenin binding; IPI:UniProtKB.::GO:0070742; F:C2H2 zinc finger domain binding; IPI:UniProtKB.::GO:0003682; F:chromatin binding; IBA:RefGenome.::GO:0043027; F:cysteine-type endopeptidase inhibitor activity involved in apoptotic process; IMP:UniProtKB.::GO:0008301; F:DNA binding, bending; ISS:UniProtKB.::GO:0035326; F:enhancer binding; IDA:UniProtKB.::GO:0030284; F:estrogen receptor activity; IDA:UniProtKB.::GO:0030331; F:estrogen receptor binding; IDA:UniProtKB.::GO:0045295; F:gamma-catenin binding; IPI:BHF-UCL.::GO:0042393; F:histone binding; IPI:UniProtKB.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IBA:RefGenome.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0060561; P:apoptotic process involved in morphogenesis; IBA:RefGenome.::GO:0042100; P:B cell proliferation; IBA:RefGenome.::GO:0030509; P:BMP signaling pathway; IBA:RefGenome.::GO:0060070; P:canonical Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0060326; P:cell chemotaxis; IDA:UniProtKB.::GO:0071353; P:cellular response to interleukin-4; IDA:UniProtKB.::GO:0060710; P:chorio-allantoic fusion; IBA:RefGenome.::GO:0021542; P:dentate gyrus development; IBA:RefGenome.::GO:0030326; P:embryonic limb morphogenesis; IBA:RefGenome.::GO:0001837; P:epithelial to mesenchymal transition; ISS:BHF-UCL.::GO:0048069; P:eye pigmentation; IBA:RefGenome.::GO:0060325; P:face morphogenesis; IBA:RefGenome.::GO:0021873; P:forebrain neuroblast division; IBA:RefGenome.::GO:0021879; P:forebrain neuron differentiation; IBA:RefGenome.::GO:0021861; P:forebrain radial glial cell differentiation; IBA:RefGenome.::GO:0021943; P:formation of radial glial scaffolds; IBA:RefGenome.::GO:0043966; P:histone H3 acetylation; IMP:UniProtKB.::GO:0043967; P:histone H4 acetylation; IMP:UniProtKB.::GO:0021854; P:hypothalamus development; IBA:RefGenome.::GO:0006917; P:induction of apoptosis; IBA:RefGenome.::GO:0030879; P:mammary gland development; IBA:RefGenome.::GO:0048747; P:muscle fiber development; IBA:RefGenome.::GO:0071866; P:negative regulation of apoptotic process in bone marrow; IMP:UniProtKB.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0022408; P:negative regulation of cell-cell adhesion; IDA:UniProtKB.::GO:0043392; P:negative regulation of DNA binding; IDA:UniProtKB.::GO:0071899; P:negative regulation of estrogen receptor binding; IDA:UniProtKB.::GO:0032696; P:negative regulation of interleukin-13 production; IDA:UniProtKB.::GO:0032713; P:negative regulation of interleukin-4 production; IDA:UniProtKB.::GO:0032714; P:negative regulation of interleukin-5 production; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0001755; P:neural crest cell migration; IBA:RefGenome.::GO:0030223; P:neutrophil differentiation; IMP:UniProtKB.::GO:0071895; P:odontoblast differentiation; IBA:RefGenome.::GO:0001649; P:osteoblast differentiation; IEP:UniProtKB.::GO:0060021; P:palate development; ISS:BHF-UCL.::GO:0048341; P:paraxial mesoderm formation; IBA:RefGenome.::GO:0001569; P:patterning of blood vessels; IBA:RefGenome.::GO:0043923; P:positive regulation by host of viral transcription; IDA:UniProtKB.::GO:0090068; P:positive regulation of cell cycle process; IDA:UniProtKB.::GO:0030307; P:positive regulation of cell growth; IMP:UniProtKB.::GO:0030335; P:positive regulation of cell migration; IMP:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; IDA:UniProtKB.::GO:0071864; P:positive regulation of cell proliferation in bone marrow; IMP:UniProtKB.::GO:0022409; P:positive regulation of cell-cell adhesion; IDA:UniProtKB.::GO:0010718; P:positive regulation of epithelial to mesenchymal transition; IMP:UniProtKB.::GO:0030854; P:positive regulation of granulocyte differentiation; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0001756; P:somitogenesis; IBA:RefGenome.::GO:0002040; P:sprouting angiogenesis; IBA:RefGenome.::GO:0045063; P:T-helper 1 cell differentiation; ISS:UniProtKB.::GO:0061153; P:trachea gland development; IBA:RefGenome.
275Q9QXN1    397   LEF1_RAT Lymphoid enhancer-binding factor 1 O...690.007     37.7     32     57GO:0005737; C:cytoplasm; IBA:RefGenome.::GO:0005667; C:transcription factor complex; IBA:RefGenome.
GO:0070016; F:armadillo repeat domain binding; IBA:RefGenome.::GO:0008013; F:beta-catenin binding; IBA:RefGenome.::GO:0003682; F:chromatin binding; IBA:RefGenome.::GO:0008301; F:DNA binding, bending; ISS:UniProtKB.::GO:0035326; F:enhancer binding; IBA:RefGenome.::GO:0030331; F:estrogen receptor binding; IBA:RefGenome.::GO:0045295; F:gamma-catenin binding; IBA:RefGenome.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IBA:RefGenome.::GO:0043565; F:sequence-specific DNA binding; IBA:RefGenome.
GO:0060561; P:apoptotic process involved in morphogenesis; IBA:RefGenome.::GO:0042100; P:B cell proliferation; IBA:RefGenome.::GO:0030509; P:BMP signaling pathway; IBA:RefGenome.::GO:0060070; P:canonical Wnt receptor signaling pathway; IBA:RefGenome.::GO:0060710; P:chorio-allantoic fusion; IBA:RefGenome.::GO:0021542; P:dentate gyrus development; IBA:RefGenome.::GO:0030326; P:embryonic limb morphogenesis; IBA:RefGenome.::GO:0001837; P:epithelial to mesenchymal transition; IBA:RefGenome.::GO:0048069; P:eye pigmentation; IBA:RefGenome.::GO:0060325; P:face morphogenesis; IBA:RefGenome.::GO:0021873; P:forebrain neuroblast division; IBA:RefGenome.::GO:0021879; P:forebrain neuron differentiation; IBA:RefGenome.::GO:0021861; P:forebrain radial glial cell differentiation; IBA:RefGenome.::GO:0021943; P:formation of radial glial scaffolds; IBA:RefGenome.::GO:0021854; P:hypothalamus development; IBA:RefGenome.::GO:0006917; P:induction of apoptosis; IBA:RefGenome.::GO:0030520; P:intracellular estrogen receptor signaling pathway; IBA:RefGenome.::GO:0001822; P:kidney development; IEP:RGD.::GO:0030879; P:mammary gland development; IBA:RefGenome.::GO:0048747; P:muscle fiber development; IBA:RefGenome.::GO:0071866; P:negative regulation of apoptotic process in bone marrow; IBA:RefGenome.::GO:0032696; P:negative regulation of interleukin-13 production; IBA:RefGenome.::GO:0032713; P:negative regulation of interleukin-4 production; IBA:RefGenome.::GO:0032714; P:negative regulation of interleukin-5 production; IBA:RefGenome.::GO:0001755; P:neural crest cell migration; IBA:RefGenome.::GO:0030223; P:neutrophil differentiation; IBA:RefGenome.::GO:0071895; P:odontoblast differentiation; IMP:RGD.::GO:0031100; P:organ regeneration; IEP:RGD.::GO:0001649; P:osteoblast differentiation; IBA:RefGenome.::GO:0048341; P:paraxial mesoderm formation; IBA:RefGenome.::GO:0001569; P:patterning of blood vessels; IBA:RefGenome.::GO:0071864; P:positive regulation of cell proliferation in bone marrow; IBA:RefGenome.::GO:0010226; P:response to lithium ion; IEP:RGD.::GO:0014070; P:response to organic cyclic compound; IEP:RGD.::GO:0043588; P:skin development; IEP:RGD.::GO:0001756; P:somitogenesis; IBA:RefGenome.::GO:0002040; P:sprouting angiogenesis; IBA:RefGenome.::GO:0061153; P:trachea gland development; IBA:RefGenome.
276P25977    764   UBF1_RAT Nucleolar transcription factor 1 OS=...680.16     33.9     29     54GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
277P17480    764   UBF1_HUMAN Nucleolar transcription factor 1 O...680.16     33.5     29     54GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; ISS:UniProtKB.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.
278Q9W7R6    240   SOX14_CHICK Transcription factor SOX-14 OS=Ga...670.007     37.4     30     55GO:0005634; C:nucleus; IC:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
279A4QNG3    239   SOX14_XENTR Transcription factor Sox-14 OS=Xe...670.007     37.4     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
280P40652    72   MG43_TARMA SRY-related protein MG43 OS=Tarent...530.007     35.4     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
281P27782    397   LEF1_MOUSE Lymphoid enhancer-binding factor 1...690.007     37.7     32     57GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005667; C:transcription factor complex; IPI:MGI.
GO:0070016; F:armadillo repeat domain binding; IBA:RefGenome.::GO:0008013; F:beta-catenin binding; IBA:RefGenome.::GO:0003682; F:chromatin binding; IDA:MGI.::GO:0008301; F:DNA binding, bending; IDA:UniProtKB.::GO:0035326; F:enhancer binding; IBA:RefGenome.::GO:0030331; F:estrogen receptor binding; IBA:RefGenome.::GO:0045295; F:gamma-catenin binding; IBA:RefGenome.::GO:0043565; F:sequence-specific DNA binding; IBA:RefGenome.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0008134; F:transcription factor binding; IPI:MGI.
GO:0060033; P:anatomical structure regression; IMP:MGI.::GO:0060561; P:apoptotic process involved in morphogenesis; IMP:MGI.::GO:0042100; P:B cell proliferation; IMP:MGI.::GO:0030509; P:BMP signaling pathway; IDA:MGI.::GO:0060070; P:canonical Wnt receptor signaling pathway; IBA:RefGenome.::GO:0060710; P:chorio-allantoic fusion; IGI:MGI.::GO:0021542; P:dentate gyrus development; IMP:MGI.::GO:0030326; P:embryonic limb morphogenesis; IGI:MGI.::GO:0001837; P:epithelial to mesenchymal transition; IMP:BHF-UCL.::GO:0048069; P:eye pigmentation; IBA:RefGenome.::GO:0060325; P:face morphogenesis; IGI:MGI.::GO:0021873; P:forebrain neuroblast division; IGI:MGI.::GO:0021879; P:forebrain neuron differentiation; IBA:RefGenome.::GO:0021861; P:forebrain radial glial cell differentiation; IGI:MGI.::GO:0021943; P:formation of radial glial scaffolds; IGI:MGI.::GO:0021854; P:hypothalamus development; IBA:RefGenome.::GO:0006917; P:induction of apoptosis; IMP:MGI.::GO:0030520; P:intracellular estrogen receptor signaling pathway; IBA:RefGenome.::GO:0030879; P:mammary gland development; IMP:MGI.::GO:0048747; P:muscle fiber development; IBA:RefGenome.::GO:0071866; P:negative regulation of apoptotic process in bone marrow; IBA:RefGenome.::GO:0032696; P:negative regulation of interleukin-13 production; IBA:RefGenome.::GO:0032713; P:negative regulation of interleukin-4 production; IBA:RefGenome.::GO:0032714; P:negative regulation of interleukin-5 production; IBA:RefGenome.::GO:0045843; P:negative regulation of striated muscle tissue development; IDA:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0001755; P:neural crest cell migration; IBA:RefGenome.::GO:0030223; P:neutrophil differentiation; IBA:RefGenome.::GO:0071895; P:odontoblast differentiation; IBA:RefGenome.::GO:0042475; P:odontogenesis of dentin-containing tooth; IMP:MGI.::GO:0001649; P:osteoblast differentiation; IBA:RefGenome.::GO:0060021; P:palate development; IMP:BHF-UCL.::GO:0048341; P:paraxial mesoderm formation; IGI:MGI.::GO:0001569; P:patterning of blood vessels; IMP:MGI.::GO:0071864; P:positive regulation of cell proliferation in bone marrow; IBA:RefGenome.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0050909; P:sensory perception of taste; IMP:MGI.::GO:0001756; P:somitogenesis; IMP:MGI.::GO:0002040; P:sprouting angiogenesis; IMP:MGI.::GO:0033153; P:T cell receptor V(D)J recombination; IGI:MGI.::GO:0045063; P:T-helper 1 cell differentiation; IDA:UniProtKB.::GO:0043586; P:tongue development; IMP:MGI.::GO:0061153; P:trachea gland development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
282Q95202    52   SRY_NEOAN Sex-determining region Y protein OS...470.008     35     36     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
283Q95175    52   SRY_CROSU Sex-determining region Y protein OS...470.008     35     36     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
284Q04892    240   SOX14_MOUSE Transcription factor SOX-14 OS=Mu...670.008     37.4     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
285B0ZTE2    239   SOX14_XENLA Transcription factor Sox-14 OS=Xe...670.008     37.4     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0007399; P:nervous system development; IEP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
286Q8AXQ4    244   SOX12_XENLA Transcription factor Sox-12 OS=Xe...540.008     37.4     33     57GO:0005634; C:nucleus; IC:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
287P61259    240   SOX14_MACFA Transcription factor SOX-14 OS=Ma...670.008     37.4     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
288O95416    240   SOX14_HUMAN Transcription factor SOX-14 OS=Ho...670.008     37.4     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0007399; P:nervous system development; TAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
289Q5FWM3    307   SOX3B_XENLA Transcription factor Sox-3-B OS=X...590.008     37.4     31     58GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0001704; P:formation of primary germ layer; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
290P53784    375   SOX3_MOUSE Transcription factor SOX-3 OS=Mus ...590.009     37.4     32     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; IDA:UniProtKB.::GO:0001106; F:RNA polymerase II transcription corepressor activity; IDA:UniProtKB.
GO:0060324; P:face development; IMP:UniProtKB.::GO:0021854; P:hypothalamus development; IMP:UniProtKB.::GO:0045665; P:negative regulation of neuron differentiation; ISS:UniProtKB.::GO:0009887; P:organ morphogenesis; IMP:MGI.::GO:0021983; P:pituitary gland development; IMP:UniProtKB.::GO:0007423; P:sensory organ development; IMP:UniProtKB.::GO:0060009; P:Sertoli cell development; IEP:UniProtKB.::GO:0007530; P:sex determination; IMP:UniProtKB.::GO:0048515; P:spermatid differentiation; IMP:MGI.
291P48430    315   SOX2_CHICK Transcription factor SOX-2 OS=Gall...610.009     37.4     31     57
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0045665; P:negative regulation of neuron differentiation; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
292Q6RVD7    245   SX21B_DANRE Transcription factor Sox-21-B OS=...540.009     37     33     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
293P36395    208   SRY_SMIMA Sex-determining region Y protein OS...650.009     37     32     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
294P41225    446   SOX3_HUMAN Transcription factor SOX-3 OS=Homo...590.01     37.4     32     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; ISS:UniProtKB.::GO:0001106; F:RNA polymerase II transcription corepressor activity; ISS:UniProtKB.
GO:0060324; P:face development; ISS:UniProtKB.::GO:0021854; P:hypothalamus development; ISS:UniProtKB.::GO:0045665; P:negative regulation of neuron differentiation; ISS:UniProtKB.::GO:0021983; P:pituitary gland development; ISS:UniProtKB.::GO:0007423; P:sensory organ development; ISS:UniProtKB.::GO:0007530; P:sex determination; IMP:UniProtKB.
295Q7M6Y2    395   SOX11_MOUSE Transcription factor SOX-11 OS=Mu...490.01     37.4     33     61GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0001158; F:enhancer sequence-specific DNA binding; IDA:UniProtKB.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IDA:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; IDA:UniProtKB.::GO:0008135; F:translation factor activity, nucleic acid binding; ISS:UniProtKB.
GO:0003211; P:cardiac ventricle formation; IMP:UniProtKB.::GO:0061386; P:closure of optic fissure; IMP:UniProtKB.::GO:0061303; P:cornea development in camera-type eye; IMP:UniProtKB.::GO:0048557; P:embryonic digestive tract morphogenesis; IMP:UniProtKB.::GO:0048704; P:embryonic skeletal system morphogenesis; IMP:UniProtKB.::GO:0061029; P:eyelid development in camera-type eye; IMP:UniProtKB.::GO:0014009; P:glial cell proliferation; IMP:UniProtKB.::GO:0060022; P:hard palate development; IMP:UniProtKB.::GO:0002089; P:lens morphogenesis in camera-type eye; IMP:UniProtKB.::GO:0060174; P:limb bud formation; IMP:UniProtKB.::GO:0060425; P:lung morphogenesis; IMP:UniProtKB.::GO:0060548; P:negative regulation of cell death; IMP:UniProtKB.::GO:0060253; P:negative regulation of glial cell proliferation; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:2000678; P:negative regulation of transcription regulatory region DNA binding; ISS:UniProtKB.::GO:0014032; P:neural crest cell development; IMP:UniProtKB.::GO:0001841; P:neural tube formation; IMP:UniProtKB.::GO:0060563; P:neuroepithelial cell differentiation; IMP:UniProtKB.::GO:0003357; P:noradrenergic neuron differentiation; IMP:UniProtKB.::GO:0003151; P:outflow tract morphogenesis; IMP:UniProtKB.::GO:0030513; P:positive regulation of BMP signaling pathway; IMP:UniProtKB.::GO:0035332; P:positive regulation of hippo signaling cascade; IMP:UniProtKB.::GO:0046887; P:positive regulation of hormone secretion; IMP:UniProtKB.::GO:2001111; P:positive regulation of lens epithelial cell proliferation; IMP:UniProtKB.::GO:0050769; P:positive regulation of neurogenesis; IDA:UniProtKB.::GO:0045666; P:positive regulation of neuron differentiation; IDA:UniProtKB.::GO:0045778; P:positive regulation of ossification; IMP:UniProtKB.::GO:0045669; P:positive regulation of osteoblast differentiation; ISS:UniProtKB.::GO:2000648; P:positive regulation of stem cell proliferation; ISS:UniProtKB.::GO:0060023; P:soft palate development; IMP:UniProtKB.::GO:0061053; P:somite development; IMP:UniProtKB.::GO:0021510; P:spinal cord development; IMP:UniProtKB.::GO:0048485; P:sympathetic nervous system development; IMP:UniProtKB.::GO:0060412; P:ventricular septum morphogenesis; IMP:UniProtKB.
296Q05344    723   SSRP1_DROME FACT complex subunit Ssrp1 OS=Dro...610.011     37.4     33     59GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0035101; C:FACT complex; IDA:FlyBase.
GO:0031492; F:nucleosomal DNA binding; IDA:FlyBase.::GO:0043621; F:protein self-association; IDA:FlyBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0001672; P:regulation of chromatin assembly or disassembly; IMP:FlyBase.::GO:0051101; P:regulation of DNA binding; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
297P47792    297   SX19A_DANRE Transcription factor Sox-19a OS=D...530.011     37     34     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
298P48433    312   SOX3_CHICK Transcription factor SOX-3 OS=Gall...610.011     37     30     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; ISS:UniProtKB.::GO:0001106; F:RNA polymerase II transcription corepressor activity; ISS:UniProtKB.
GO:0060324; P:face development; ISS:UniProtKB.::GO:0021854; P:hypothalamus development; ISS:UniProtKB.::GO:0045665; P:negative regulation of neuron differentiation; IMP:UniProtKB.::GO:0021983; P:pituitary gland development; ISS:UniProtKB.::GO:0007423; P:sensory organ development; ISS:UniProtKB.
299P0C1G9    395   SOX11_RAT Transcription factor SOX-11 OS=Ratt...490.011     37     33     61GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0001158; F:enhancer sequence-specific DNA binding; ISS:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IDA:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; IDA:UniProtKB.::GO:0008135; F:translation factor activity, nucleic acid binding; ISS:UniProtKB.
GO:0003211; P:cardiac ventricle formation; ISS:UniProtKB.::GO:0061386; P:closure of optic fissure; ISS:UniProtKB.::GO:0061303; P:cornea development in camera-type eye; ISS:UniProtKB.::GO:0048557; P:embryonic digestive tract morphogenesis; ISS:UniProtKB.::GO:0048704; P:embryonic skeletal system morphogenesis; ISS:UniProtKB.::GO:0061029; P:eyelid development in camera-type eye; ISS:UniProtKB.::GO:0014009; P:glial cell proliferation; ISS:UniProtKB.::GO:0060022; P:hard palate development; ISS:UniProtKB.::GO:0001822; P:kidney development; IEP:RGD.::GO:0002089; P:lens morphogenesis in camera-type eye; ISS:UniProtKB.::GO:0060174; P:limb bud formation; ISS:UniProtKB.::GO:0060425; P:lung morphogenesis; ISS:UniProtKB.::GO:0060548; P:negative regulation of cell death; ISS:UniProtKB.::GO:0060253; P:negative regulation of glial cell proliferation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:2000678; P:negative regulation of transcription regulatory region DNA binding; IMP:UniProtKB.::GO:0014032; P:neural crest cell development; ISS:UniProtKB.::GO:0001841; P:neural tube formation; ISS:UniProtKB.::GO:0060563; P:neuroepithelial cell differentiation; ISS:UniProtKB.::GO:0003357; P:noradrenergic neuron differentiation; IMP:UniProtKB.::GO:0014003; P:oligodendrocyte development; IEP:RGD.::GO:0003151; P:outflow tract morphogenesis; ISS:UniProtKB.::GO:0030513; P:positive regulation of BMP signaling pathway; ISS:UniProtKB.::GO:0035332; P:positive regulation of hippo signaling cascade; ISS:UniProtKB.::GO:0046887; P:positive regulation of hormone secretion; ISS:UniProtKB.::GO:2001111; P:positive regulation of lens epithelial cell proliferation; ISS:UniProtKB.::GO:0050769; P:positive regulation of neurogenesis; ISS:UniProtKB.::GO:0045666; P:positive regulation of neuron differentiation; ISS:UniProtKB.::GO:0045778; P:positive regulation of ossification; ISS:UniProtKB.::GO:0045669; P:positive regulation of osteoblast differentiation; ISS:UniProtKB.::GO:2000648; P:positive regulation of stem cell proliferation; ISS:UniProtKB.::GO:0060023; P:soft palate development; ISS:UniProtKB.::GO:0061053; P:somite development; ISS:UniProtKB.::GO:0021510; P:spinal cord development; ISS:UniProtKB.::GO:0048485; P:sympathetic nervous system development; ISS:UniProtKB.::GO:0060412; P:ventricular septum morphogenesis; ISS:UniProtKB.
300P35716    441   SOX11_HUMAN Transcription factor SOX-11 OS=Ho...490.011     37     33     61GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0001158; F:enhancer sequence-specific DNA binding; IDA:UniProtKB.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; ISS:UniProtKB.::GO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; IDA:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; ISS:UniProtKB.::GO:0008135; F:translation factor activity, nucleic acid binding; IDA:UniProtKB.
GO:0003211; P:cardiac ventricle formation; ISS:UniProtKB.::GO:0061386; P:closure of optic fissure; ISS:UniProtKB.::GO:0061303; P:cornea development in camera-type eye; ISS:UniProtKB.::GO:0048557; P:embryonic digestive tract morphogenesis; ISS:UniProtKB.::GO:0048704; P:embryonic skeletal system morphogenesis; ISS:UniProtKB.::GO:0061029; P:eyelid development in camera-type eye; ISS:UniProtKB.::GO:0014009; P:glial cell proliferation; ISS:UniProtKB.::GO:0060022; P:hard palate development; ISS:UniProtKB.::GO:0002089; P:lens morphogenesis in camera-type eye; ISS:UniProtKB.::GO:0060174; P:limb bud formation; ISS:UniProtKB.::GO:0060425; P:lung morphogenesis; ISS:UniProtKB.::GO:0060548; P:negative regulation of cell death; ISS:UniProtKB.::GO:0060253; P:negative regulation of glial cell proliferation; IMP:UniProtKB.::GO:0050672; P:negative regulation of lymphocyte proliferation; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:2000678; P:negative regulation of transcription regulatory region DNA binding; ISS:UniProtKB.::GO:0014032; P:neural crest cell development; ISS:UniProtKB.::GO:0001841; P:neural tube formation; ISS:UniProtKB.::GO:0060563; P:neuroepithelial cell differentiation; ISS:UniProtKB.::GO:0003357; P:noradrenergic neuron differentiation; ISS:UniProtKB.::GO:0003151; P:outflow tract morphogenesis; ISS:UniProtKB.::GO:0030513; P:positive regulation of BMP signaling pathway; ISS:UniProtKB.::GO:0035332; P:positive regulation of hippo signaling cascade; ISS:UniProtKB.::GO:0046887; P:positive regulation of hormone secretion; ISS:UniProtKB.::GO:2001111; P:positive regulation of lens epithelial cell proliferation; ISS:UniProtKB.::GO:0050769; P:positive regulation of neurogenesis; ISS:UniProtKB.::GO:0045666; P:positive regulation of neuron differentiation; IMP:UniProtKB.::GO:0045778; P:positive regulation of ossification; IMP:UniProtKB.::GO:0045669; P:positive regulation of osteoblast differentiation; IMP:UniProtKB.::GO:2000648; P:positive regulation of stem cell proliferation; IMP:UniProtKB.::GO:0017015; P:regulation of transforming growth factor beta receptor signaling pathway; IEP:UniProtKB.::GO:0072404; P:signal transduction involved in G1/S transition checkpoint; IEP:UniProtKB.::GO:0060023; P:soft palate development; ISS:UniProtKB.::GO:0061053; P:somite development; ISS:UniProtKB.::GO:0021510; P:spinal cord development; ISS:UniProtKB.::GO:0048485; P:sympathetic nervous system development; ISS:UniProtKB.::GO:0060412; P:ventricular septum morphogenesis; ISS:UniProtKB.
301Q2PG84    393   SOX1_XENLA Transcription factor Sox-1 OS=Xeno...730.011     37     26     51GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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