Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR089C-A
Length:
99
Number of sequences:
5887
Description:
YBR089C-A NHP6B SGDID:S000002157, Chr II from 426489-426190, Genome Release 64-1-1, reverse complement, Verified ORF, "High-mobility group (HMG) protein that binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; homologous to mammalian HMGB1 and HMGB2"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241Q69FB1    229   SRY_BUBBU Sex-determining region Y protein OS...620.002     38.9     32     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
242P51501    227   SRY_CALJA Sex-determining region Y protein OS...570.002     38.9     33     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
243Q62661    513   HBP1_RAT HMG box-containing protein 1 OS=Ratt...650.002     39.3     35     57GO:0005634; C:nucleus; IC:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0043268; P:positive regulation of potassium ion transport; IDA:RGD.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
244Q2KJ34    512   HBP1_BOVIN HMG box-containing protein 1 OS=Bo...650.002     39.3     35     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
245P40636    72   ADW5_ALLMI SRY-related protein ADW5 OS=Alliga...530.002     36.6     30     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
246Q9XT60    220   SRY_CANFA Sex-determining region Y protein OS...570.002     38.5     32     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
247P25976    765   UBF1_MOUSE Nucleolar transcription factor 1 O...680.16     33.9     29     54GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
248P40634    72   ADW2_ALLMI SRY-related protein ADW2 OS=Alliga...540.003     36.6     30     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
249P48046    204   SRY_GORGO Sex-determining region Y protein OS...540.003     38.5     33     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
250Q05066    204   SRY_HUMAN Sex-determining region Y protein OS...540.003     38.5     33     61GO:0005737; C:cytoplasm; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; NAS:UniProtKB.::GO:2000020; P:positive regulation of male gonad development; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.
251Q863C0    229   SRY_PRZAL Sex-determining region Y protein OS...620.003     38.5     34     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
252Q91ZW1    244   TFAM_RAT Transcription factor A, mitochondria...920.008     37.4     32     55GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0031072; F:heat shock protein binding; IPI:RGD.::GO:0070363; F:mitochondrial light strand promoter sense binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:RGD.
GO:0006264; P:mitochondrial DNA replication; TAS:RGD.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006391; P:transcription initiation from mitochondrial promoter; ISS:UniProtKB.
253P40635    72   ADW4_ALLMI SRY-related protein ADW4 OS=Alliga...530.003     36.6     30     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
254P40638    72   AES2_ALLMI SRY-related protein AES2 OS=Alliga...540.004     36.2     30     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
255Q8BVE8    1365   NSD2_MOUSE Probable histone-lysine N-methyltr...650.004     38.9     32     60GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0018024; F:histone-lysine N-methyltransferase activity; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0003289; P:atrial septum primum morphogenesis; IMP:MGI.::GO:0003290; P:atrial septum secundum morphogenesis; IMP:MGI.::GO:0060348; P:bone development; IMP:MGI.::GO:0003149; P:membranous septum morphogenesis; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
256Q28783    233   SRY_PONPY Sex-determining region Y protein OS...540.004     38.1     33     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
257Q3USZ2    394   UBFL1_MOUSE Upstream-binding factor 1-like pr...530.004     38.5     40     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
258Q66JF1    383   SOX11_XENTR Transcription factor Sox-11 OS=Xe...540.004     38.5     31     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
259Q6P0E1    315   SOX2_DANRE Transcription factor Sox-2 OS=Dani...610.004     38.1     31     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IC:ZFIN.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0048592; P:eye morphogenesis; IMP:ZFIN.::GO:0031101; P:fin regeneration; IMP:ZFIN.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
260Q28798    204   SRY_PANTR Sex-determining region Y protein OS...540.005     37.7     33     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.
261Q91731    382   SX11A_XENLA Transcription factor Sox-11-A OS=...490.005     38.1     33     61GO:0005634; C:nucleus; IC:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
262Q8WY36    941   BBX_HUMAN HMG box transcription factor BBX OS...540.005     38.5     31     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
263Q8VBW5    907   BBX_MOUSE HMG box transcription factor BBX OS...540.005     38.5     31     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
264P40650    374   SX11B_XENLA Transcription factor Sox-11-B OS=...540.005     38.1     31     61GO:0005634; C:nucleus; IC:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
265P43267    231   SOX15_MOUSE Protein SOX-15 OS=Mus musculus (M...600.005     37.7     30     62GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.
GO:0048627; P:myoblast development; IMP:MGI.::GO:0045843; P:negative regulation of striated muscle tissue development; IDA:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0043403; P:skeletal muscle tissue regeneration; IMP:MGI.
266P55863    309   SOX3A_XENLA Transcription factor Sox-3-A OS=X...720.005     37.7     26     51GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0001704; P:formation of primary germ layer; IMP:UniProtKB.::GO:0030514; P:negative regulation of BMP signaling pathway; IMP:UniProtKB.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
267P48432    319   SOX2_MOUSE Transcription factor SOX-2 OS=Mus ...610.005     37.7     31     57GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0021984; P:adenohypophysis development; IMP:MGI.::GO:0001708; P:cell fate specification; IMP:MGI.::GO:0021987; P:cerebral cortex development; IMP:MGI.::GO:0050973; P:detection of mechanical stimulus involved in equilibrioception; IMP:MGI.::GO:0050910; P:detection of mechanical stimulus involved in sensory perception of sound; IMP:MGI.::GO:0048852; P:diencephalon morphogenesis; IMP:MGI.::GO:0060441; P:epithelial tube branching involved in lung morphogenesis; IDA:MGI.::GO:0021879; P:forebrain neuron differentiation; IMP:MGI.::GO:0042472; P:inner ear morphogenesis; IMP:MGI.::GO:0060235; P:lens induction in camera-type eye; IGI:MGI.::GO:0048286; P:lung alveolus development; IDA:MGI.::GO:0030539; P:male genitalia development; IMP:MGI.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0045668; P:negative regulation of osteoblast differentiation; IDA:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0048663; P:neuron fate commitment; IMP:MGI.::GO:0097150; P:neuronal stem cell maintenance; IGI:UniProtKB.::GO:0030910; P:olfactory placode formation; IGI:MGI.::GO:0046148; P:pigment biosynthetic process; IMP:MGI.::GO:0030858; P:positive regulation of epithelial cell differentiation; IDA:MGI.::GO:0002052; P:positive regulation of neuroblast proliferation; IMP:MGI.::GO:0045666; P:positive regulation of neuron differentiation; IMP:MGI.::GO:0045747; P:positive regulation of Notch signaling pathway; IDA:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0032526; P:response to retinoic acid; IDA:MGI.::GO:0060042; P:retina morphogenesis in camera-type eye; IMP:MGI.::GO:0043586; P:tongue development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
268Q811W0    276   SOX21_MOUSE Transcription factor SOX-21 OS=Mu...540.006     37.7     33     59GO:0005634; C:nucleus; IC:MGI.
GO:0003677; F:DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0001942; P:hair follicle development; IMP:MGI.::GO:0043588; P:skin development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
269P36392    55   SRY_MELME Sex-determining region Y protein OS...470.006     35.4     36     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
270P48431    317   SOX2_HUMAN Transcription factor SOX-2 OS=Homo...610.006     37.7     31     57GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005667; C:transcription factor complex; TAS:BHF-UCL.
GO:0035198; F:miRNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0007050; P:cell cycle arrest; IDA:UniProtKB.::GO:0006325; P:chromatin organization; NAS:UniProtKB.::GO:0001714; P:endodermal cell fate specification; IDA:MGI.::GO:0021781; P:glial cell fate commitment; NAS:UniProtKB.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0050680; P:negative regulation of epithelial cell proliferation; IDA:UniProtKB.::GO:0045665; P:negative regulation of neuron differentiation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0097150; P:neuronal stem cell maintenance; ISS:UniProtKB.::GO:0001649; P:osteoblast differentiation; IDA:UniProtKB.::GO:0043410; P:positive regulation of MAPK cascade; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043281; P:regulation of cysteine-type endopeptidase activity involved in apoptotic process; IDA:UniProtKB.::GO:0070848; P:response to growth factor stimulus; IDA:UniProtKB.::GO:0009611; P:response to wounding; IEP:UniProtKB.::GO:0035019; P:somatic stem cell maintenance; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
271P54231    320   SOX2_SHEEP Transcription factor SOX-2 OS=Ovis...610.006     37.7     31     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0044212; F:transcription regulatory region DNA binding; ISS:BHF-UCL.
GO:0045665; P:negative regulation of neuron differentiation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0097150; P:neuronal stem cell maintenance; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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