Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR089C-A
Length:
99
Number of sequences:
5887
Description:
YBR089C-A NHP6B SGDID:S000002157, Chr II from 426489-426190, Genome Release 64-1-1, reverse complement, Verified ORF, "High-mobility group (HMG) protein that binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; homologous to mammalian HMGB1 and HMGB2"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121P40647    757   SOX5_XENLA Transcription factor Sox-5 OS=Xeno...620.000003     48.5     39     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0090263; P:positive regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
122Q5RCU4    787   SOX6_PONAB Transcription factor SOX-6 OS=Pong...620.000005     47.8     37     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
123P40645    827   SOX6_MOUSE Transcription factor SOX-6 OS=Mus ...620.000006     47.4     37     61GO:0005667; C:transcription factor complex; IC:MGI.
GO:0046982; F:protein heterodimerization activity; IPI:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:MGI.
GO:0035051; P:cardiac cell differentiation; IDA:MGI.::GO:0051216; P:cartilage development; IGI:MGI.::GO:0000902; P:cell morphogenesis; IMP:MGI.::GO:0048821; P:erythrocyte development; IMP:MGI.::GO:0016458; P:gene silencing; IMP:MGI.::GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0042692; P:muscle cell differentiation; IDA:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0021778; P:oligodendrocyte cell fate specification; IMP:MGI.::GO:0032332; P:positive regulation of chondrocyte differentiation; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:MGI.::GO:0009791; P:post-embryonic development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
124P35712    828   SOX6_HUMAN Transcription factor SOX-6 OS=Homo...620.000006     47.4     37     61GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0071560; P:cellular response to transforming growth factor beta stimulus; IDA:UniProtKB.::GO:0007517; P:muscle organ development; NAS:UniProtKB.::GO:0061036; P:positive regulation of cartilage development; IDA:UniProtKB.::GO:0032332; P:positive regulation of chondrocyte differentiation; IDA:UniProtKB.::GO:2000741; P:positive regulation of mesenchymal stem cell differentiation; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
125Q61473    419   SOX17_MOUSE Transcription factor SOX-17 OS=Mu...650.000007     47     34     65
GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003713; F:transcription coactivator activity; IDA:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0060070; P:canonical Wnt receptor signaling pathway; IDA:MGI.::GO:0003142; P:cardiogenic plate morphogenesis; IMP:BHF-UCL.::GO:0042074; P:cell migration involved in gastrulation; IMP:MGI.::GO:0061009; P:common bile duct development; IMP:MGI.::GO:0048617; P:embryonic foregut morphogenesis; IMP:BHF-UCL.::GO:0048568; P:embryonic organ development; IMP:MGI.::GO:0060956; P:endocardial cell differentiation; IGI:MGI.::GO:0060214; P:endocardium formation; IGI:MGI.::GO:0007493; P:endodermal cell fate determination; IDA:MGI.::GO:0061031; P:endodermal digestive tract morphogenesis; IMP:BHF-UCL.::GO:0061010; P:gall bladder development; IMP:MGI.::GO:0001947; P:heart looping; IMP:UniProtKB.::GO:0001828; P:inner cell mass cellular morphogenesis; IMP:MGI.::GO:0042662; P:negative regulation of mesodermal cell fate specification; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:MGI.::GO:0003308; P:negative regulation of Wnt receptor signaling pathway involved in heart development; IMP:BHF-UCL.::GO:0003151; P:outflow tract morphogenesis; IGI:BHF-UCL.::GO:0045597; P:positive regulation of cell differentiation; IDA:MGI.::GO:0045732; P:positive regulation of protein catabolic process; IDA:UniProtKB.::GO:0048643; P:positive regulation of skeletal muscle tissue development; IDA:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:2000043; P:regulation of cardiac cell fate specification; IMP:BHF-UCL.::GO:2000035; P:regulation of stem cell division; IMP:MGI.::GO:0072091; P:regulation of stem cell proliferation; IDA:MGI.::GO:0060807; P:regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification; IMP:BHF-UCL.::GO:0021903; P:rostrocaudal neural tube patterning; IMP:MGI.::GO:0023019; P:signal transduction involved in regulation of gene expression; IDA:MGI.::GO:0007283; P:spermatogenesis; IDA:MGI.::GO:0048866; P:stem cell fate specification; IDA:MGI.
126Q28GD5    362   SOX7_XENTR Transcription factor Sox-7 OS=Xeno...660.000008     46.6     32     62GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0001706; P:endoderm formation; ISS:UniProtKB.::GO:0007507; P:heart development; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0048793; P:pronephros development; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
127Q9MAT6    448   HMG15_ARATH High mobility group B protein 15 ...750.000008     46.6     37     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
128O42342    362   SOX7_XENLA Transcription factor Sox-7 OS=Xeno...660.000009     46.2     32     62GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0001706; P:endoderm formation; IMP:UniProtKB.::GO:0007507; P:heart development; IMP:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
129Q9N1Q5    242   SP100_HYLLA Nuclear autoantigen Sp-100 OS=Hyl...530.019     36.2     36     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
130Q06943    111   HMGZ_DROME High mobility group protein Z OS=D...700.00002     43.1     36     54GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
131Q8AWH3    383   SX17A_XENTR Transcription factor Sox-17-alpha...540.00002     45.1     35     69GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0007492; P:endoderm development; ISS:UniProtKB.::GO:0007369; P:gastrulation; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
132Q9H6I2    414   SOX17_HUMAN Transcription factor SOX-17 OS=Ho...540.00003     45.1     35     69GO:0005667; C:transcription factor complex; IDA:BHF-UCL.
GO:0008013; F:beta-catenin binding; IPI:BHF-UCL.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; ISS:BHF-UCL.::GO:0008134; F:transcription factor binding; IPI:BHF-UCL.::GO:0044212; F:transcription regulatory region DNA binding; ISS:BHF-UCL.
GO:0001525; P:angiogenesis; ISS:BHF-UCL.::GO:0060913; P:cardiac cell fate determination; IMP:BHF-UCL.::GO:0003142; P:cardiogenic plate morphogenesis; ISS:BHF-UCL.::GO:0048617; P:embryonic foregut morphogenesis; ISS:BHF-UCL.::GO:0060956; P:endocardial cell differentiation; ISS:BHF-UCL.::GO:0060214; P:endocardium formation; ISS:BHF-UCL.::GO:0061031; P:endodermal digestive tract morphogenesis; ISS:BHF-UCL.::GO:0060914; P:heart formation; TAS:BHF-UCL.::GO:0001947; P:heart looping; ISS:UniProtKB.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IMP:BHF-UCL.::GO:0030308; P:negative regulation of cell growth; IMP:BHF-UCL.::GO:0003151; P:outflow tract morphogenesis; ISS:BHF-UCL.::GO:0031648; P:protein destabilization; IMP:BHF-UCL.::GO:0050821; P:protein stabilization; IMP:BHF-UCL.::GO:0060807; P:regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification; ISS:BHF-UCL.::GO:0072001; P:renal system development; IMP:BHF-UCL.::GO:0001570; P:vasculogenesis; ISS:BHF-UCL.
133P40646    380   SOX7_MOUSE Transcription factor SOX-7 OS=Mus ...660.00003     45.1     32     62GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:MGI.
134Q3KQ35    380   S17AA_XENLA Transcription factor Sox-17-alpha...540.00005     44.3     33     69GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0042074; P:cell migration involved in gastrulation; IMP:UniProtKB.::GO:0007492; P:endoderm development; IMP:UniProtKB.::GO:0007440; P:foregut morphogenesis; IMP:UniProtKB.::GO:0007442; P:hindgut morphogenesis; IMP:UniProtKB.::GO:0007494; P:midgut development; IMP:UniProtKB.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
135Q9BT81    388   SOX7_HUMAN Transcription factor SOX-7 OS=Homo...540.00005     44.3     35     69GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; ISS:BHF-UCL.
GO:0001706; P:endoderm formation; IDA:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0043280; P:positive regulation of cysteine-type endopeptidase activity involved in apoptotic process; IDA:UniProtKB.::GO:0060828; P:regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
136P35713    384   SOX18_HUMAN Transcription factor SOX-18 OS=Ho...690.00005     43.9     32     59GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0001525; P:angiogenesis; IEP:UniProtKB.::GO:0043534; P:blood vessel endothelial cell migration; IEP:UniProtKB.::GO:0060956; P:endocardial cell differentiation; ISS:BHF-UCL.::GO:0060214; P:endocardium formation; ISS:BHF-UCL.::GO:0061028; P:establishment of endothelial barrier; IMP:UniProtKB.::GO:0001947; P:heart looping; ISS:BHF-UCL.::GO:0001946; P:lymphangiogenesis; IMP:UniProtKB.::GO:0060836; P:lymphatic endothelial cell differentiation; ISS:BHF-UCL.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:BHF-UCL.::GO:0003151; P:outflow tract morphogenesis; ISS:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0001570; P:vasculogenesis; ISS:BHF-UCL.
137P40649    567   SOX13_XENLA Transcription factor Sox-13 OS=Xe...650.00006     44.3     35     60GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
138Q90ZH9    377   S17AB_XENLA Transcription factor Sox-17-alpha...540.00006     43.9     33     69GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0042074; P:cell migration involved in gastrulation; IMP:UniProtKB.::GO:0007492; P:endoderm development; IMP:UniProtKB.::GO:0007442; P:hindgut morphogenesis; IMP:UniProtKB.::GO:0007494; P:midgut development; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
139Q9N1Q7    215   SP100_PANTR Nuclear autoantigen Sp-100 OS=Pan...510.029     35.4     39     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
140Q9N1Q6    225   SP100_GORGO Nuclear autoantigen Sp-100 OS=Gor...510.008     37.4     39     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
141Q90ZH7    361   SX18B_XENLA Transcription factor Sox-18B OS=X...540.00009     43.5     33     67GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0007507; P:heart development; IMP:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
142Q90ZH8    363   SX18A_XENLA Transcription factor Sox-18A OS=X...540.0001     43.1     33     67GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
143Q9SGS2    338   HMGB9_ARATH High mobility group B protein 9 O...760.0001     43.1     34     51GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003677; F:DNA binding; IDA:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
144Q9USU7    310   YHHB_SCHPO HMG box-containing protein C28F2.1...840.0001     43.1     31     55GO:0005794; C:Golgi apparatus; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006916; P:anti-apoptosis; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:PomBase.
145Q28EW4    566   SOX13_XENTR Transcription factor Sox-13 OS=Xe...620.0001     43.1     35     61GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
146P40656    669   SOX14_DROME Putative transcription factor SOX...830.0001     43.1     31     53GO:0005634; C:nucleus; IMP:FlyBase.
GO:0008301; F:DNA binding, bending; IDA:FlyBase.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase.
GO:0048813; P:dendrite morphogenesis; IGI:FlyBase.::GO:0007552; P:metamorphosis; IMP:FlyBase.::GO:0016322; P:neuron remodeling; IGI:FlyBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
147Q9UGU5    601   HMGX4_HUMAN HMG domain-containing protein 4 O...540.0001     43.1     35     61GO:0016589; C:NURF complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; NAS:UniProtKB.
GO:0008333; P:endosome to lysosome transport; NAS:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; ISS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
148Q5BL56    554   HMGX4_XENTR HMG box-containing protein 4 OS=X...510.0001     43.1     37     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0019901; F:protein kinase binding; ISS:UniProtKB.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; ISS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
149Q6F2F0    376   S17B3_XENTR Transcription factor Sox-17-beta....810.0002     42.7     28     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007369; P:gastrulation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
150Q02486    183   ABF2_YEAST ARS-binding factor 2, mitochondria...500.1     33.9     30     60GO:0000262; C:mitochondrial chromosome; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008301; F:DNA binding, bending; IDA:SGD.
GO:0090139; P:mitochondrial DNA packaging; IMP:SGD.::GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.::GO:0000001; P:mitochondrion inheritance; IMP:SGD.
151Q8AWH2    376   S17B1_XENTR Transcription factor Sox-17-beta....810.0002     42.4     28     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007369; P:gastrulation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 448 121 - 150
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::