Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR088C
Length:
258
Number of sequences:
5887
Description:
YBR088C POL30 SGDID:S000000292, Chr II from 425766-424990, Genome Release 64-1-1, reverse complement, Verified ORF, "Proliferating cell nuclear antigen (PCNA), functions as the sliding clamp for DNA polymerase delta; may function as a docking site for other proteins required for mitotic and meiotic chromosomal DNA replication and for DNA repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P15873    258   PCNA_YEAST Proliferating cell nuclear antigen...2580     515     100     100GO:0005634; C:nucleus; IDA:SGD.::GO:0043626; C:PCNA complex; TAS:SGD.::GO:0005657; C:replication fork; TAS:SGD.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IDA:SGD.::GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0006284; P:base-excision repair; TAS:SGD.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:SGD.::GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0006273; P:lagging strand elongation; IDA:SGD.::GO:0006272; P:leading strand elongation; IDA:SGD.::GO:0000710; P:meiotic mismatch repair; IMP:SGD.::GO:0007064; P:mitotic sister chromatid cohesion; IPI:SGD.::GO:0006289; P:nucleotide-excision repair; IMP:SGD.::GO:0006301; P:postreplication repair; IMP:SGD.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
2Q03392    260   PCNA_SCHPO Proliferating cell nuclear antigen...2584e-80     248     45     69GO:0005829; C:cytosol; IDA:PomBase.::GO:0043596; C:nuclear replication fork; IC:PomBase.::GO:0043626; C:PCNA complex; IMP:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; ISS:PomBase.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0034644; P:cellular response to UV; IMP:PomBase.::GO:0006271; P:DNA strand elongation involved in DNA replication; IC:PomBase.::GO:0006301; P:postreplication repair; IGI:PomBase.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.::GO:0010212; P:response to ionizing radiation; IMP:PomBase.
3Q43124    263   PCNA_BRANA Proliferating cell nuclear antigen...2593e-71     226     40     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
4O82797    264   PCNA_TOBAC Proliferating cell nuclear antigen...2595e-71     225     40     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
5Q9M7Q7    263   PCNA1_ARATH Proliferating cellular nuclear an...2598e-71     224     40     66GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
6Q9ZW35    264   PCNA2_ARATH Proliferating cell nuclear antige...2591e-70     224     40     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0042276; P:error-prone translesion synthesis; IDA:TAIR.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
7Q00268    264   PCNA1_DAUCA Proliferating cell nuclear antige...2591e-70     224     39     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
8Q43266    263   PCNA_MAIZE Proliferating cell nuclear antigen...2591e-70     224     40     66GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
9P17070    263   PCNA_ORYSJ Proliferating cell nuclear antigen...2591e-68     219     39     66GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
10P24314    268   PCNA_CATRO Proliferating cell nuclear antigen...2614e-68     218     39     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
11O82134    266   PCNA_PEA Proliferating cell nuclear antigen O...2598e-67     214     37     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
12O16852    260   PCNA_SARCR Proliferating cell nuclear antigen...2593e-65     210     37     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
13Q9MAY3    264   PCNA_POPNI Proliferating cell nuclear antigen...2598e-65     209     36     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
14P17917    260   PCNA_DROME Proliferating cell nuclear antigen...2591e-64     209     36     64GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0019730; P:antimicrobial humoral response; IMP:FlyBase.::GO:0006261; P:DNA-dependent DNA replication; TAS:FlyBase.::GO:0007307; P:eggshell chorion gene amplification; TAS:FlyBase.::GO:0006298; P:mismatch repair; TAS:FlyBase.::GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0006289; P:nucleotide-excision repair; TAS:FlyBase.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
15Q00265    365   PCNA2_DAUCA Proliferating cell nuclear antige...2591e-64     212     37     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
16O01377    260   PCNA_BOMMO Proliferating cell nuclear antigen...2592e-63     205     38     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
17O02115    263   PCNA_CAEEL Proliferating cell nuclear antigen...2606e-63     204     40     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0000910; P:cytokinesis; IMP:WormBase.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
18P61258    261   PCNA_MACFA Proliferating cell nuclear antigen...2592e-61     200     36     63GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0032077; P:positive regulation of deoxyribonuclease activity; ISS:UniProtKB.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
19P12004    261   PCNA_HUMAN Proliferating cell nuclear antigen...2592e-61     200     36     63GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005663; C:DNA replication factor C complex; TAS:UniProtKB.::GO:0015630; C:microtubule cytoskeleton; IDA:HPA.::GO:0043596; C:nuclear replication fork; IDA:BHF-UCL.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; IDA:UniProtKB.
GO:0032139; F:dinucleotide insertion or deletion binding; IDA:BHF-UCL.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0032405; F:MutLalpha complex binding; IDA:HGNC.::GO:0000701; F:purine-specific mismatch base pair DNA N-glycosylase activity; IDA:BHF-UCL.::GO:0030971; F:receptor tyrosine kinase binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; TAS:ProtInc.::GO:0006271; P:DNA strand elongation involved in DNA replication; TAS:Reactome.::GO:0006298; P:mismatch repair; IDA:BHF-UCL.::GO:0006297; P:nucleotide-excision repair, DNA gap filling; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; NAS:UniProtKB.::GO:0032077; P:positive regulation of deoxyribonuclease activity; IDA:UniProtKB.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0000083; P:regulation of transcription involved in G1/S phase of mitotic cell cycle; TAS:Reactome.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0000722; P:telomere maintenance via recombination; TAS:Reactome.::GO:0032201; P:telomere maintenance via semi-conservative replication; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0019985; P:translesion synthesis; IDA:UniProtKB.
20Q3ZBW4    261   PCNA_BOVIN Proliferating cell nuclear antigen...2593e-61     200     36     63GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0032077; P:positive regulation of deoxyribonuclease activity; ISS:UniProtKB.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
21P57761    261   PCNA_CRIGR Proliferating cell nuclear antigen...2594e-61     199     36     63GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0032077; P:positive regulation of deoxyribonuclease activity; ISS:UniProtKB.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
22P17918    261   PCNA_MOUSE Proliferating cell nuclear antigen...2594e-61     199     36     63GO:0000307; C:cyclin-dependent protein kinase holoenzyme complex; IPI:MGI.::GO:0005652; C:nuclear lamina; IDA:MGI.::GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006287; P:base-excision repair, gap-filling; IDA:MGI.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0032077; P:positive regulation of deoxyribonuclease activity; ISS:UniProtKB.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
23P04961    261   PCNA_RAT Proliferating cell nuclear antigen O...2596e-61     199     36     63GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0007507; P:heart development; IEP:RGD.::GO:0032077; P:positive regulation of deoxyribonuclease activity; ISS:UniProtKB.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0046686; P:response to cadmium ion; IEP:RGD.::GO:0033993; P:response to lipid; IDA:RGD.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
24Q9DEA3    262   PCNA_CHICK Proliferating cell nuclear antigen...2598e-61     199     35     63GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
25P22177    236   PCNA_SOYBN Proliferating cell nuclear antigen...2262e-60     197     38     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
26Q9DDF1    262   PCNA_COTJA Proliferating cell nuclear antigen...2595e-60     197     35     63GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
27P53358    264   PCNA_STYCL Proliferating cell nuclear antigen...2603e-59     195     37     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043626; C:PCNA complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
28Q6B6N4    260   PCNA_HAPBU Proliferating cell nuclear antigen...2582e-57     190     34     63GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
29Q9PTP1    260   PCNA_DANRE Proliferating cell nuclear antigen...2582e-57     190     34     63GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0009617; P:response to bacterium; IDA:ZFIN.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
30P18248    261   PCNA_XENLA Proliferating cell nuclear antigen...2592e-56     187     34     63GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
31Q9W644    260   PCNA_ANGJA Proliferating cell nuclear antigen...2584e-56     186     34     62GO:0043626; C:PCNA complex; IEA:InterPro.::GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.
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