Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR087W
Length:
354
Number of sequences:
5887
Description:
YBR087W RFC5 SGDID:S000000291, Chr II from 423765-424829, Genome Release 64-1-1, Verified ORF, "Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q54E21    338   RFC2_DICDI Probable replication factor C subu...2554e-24     104     31     49GO:0005663; C:DNA replication factor C complex; ISS:dictyBase.::GO:0031391; C:Elg1 RFC-like complex; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0031389; C:Rad17 RFC-like complex; ISS:dictyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006272; P:leading strand elongation; ISS:dictyBase.::GO:0006298; P:mismatch repair; ISS:dictyBase.
62O94449    342   RFC4_SCHPO Replication factor C subunit 4 OS=...2364e-23     101     30     50GO:0031390; C:Ctf18 RFC-like complex; TAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005663; C:DNA replication factor C complex; ISS:PomBase.::GO:0031391; C:Elg1 RFC-like complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IC:PomBase.::GO:0031389; C:Rad17 RFC-like complex; TAS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006272; P:leading strand elongation; ISS:PomBase.
63A5UMF3    315   RFCS_METS3 Replication factor C small subunit...2381e-22     99.8     29     50GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
64Q8SQM0    309   RFC4_ENCCU Replication factor C subunit 4 OS=...2392e-22     99.4     32     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
65A7I8Y0    322   RFCS_METB6 Replication factor C small subunit...2432e-22     99     28     47GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
66A3CUX9    322   RFCS_METMJ Replication factor C small subunit...2413e-22     99     28     48GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
67P53034    331   RFC2_DROME Replication factor C subunit 2 OS=...2405e-22     98.2     31     49GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IMP:UniProtKB.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0000077; P:DNA damage checkpoint; IMP:FlyBase.::GO:0006281; P:DNA repair; TAS:FlyBase.::GO:0000076; P:DNA replication checkpoint; IMP:FlyBase.::GO:0006271; P:DNA strand elongation involved in DNA replication; TAS:FlyBase.::GO:0016321; P:female meiosis chromosome segregation; IMP:FlyBase.::GO:0007076; P:mitotic chromosome condensation; IMP:FlyBase.
68O74111    338   RFC3_BLAAD Replication factor C subunit 3 OS=...2361e-21     97.1     29     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.
69P40339    323   RFC4_YEAST Replication factor C subunit 4 OS=...2439e-21     94.7     29     49GO:0031390; C:Ctf18 RFC-like complex; IPI:SGD.::GO:0005663; C:DNA replication factor C complex; IDA:SGD.::GO:0031391; C:Elg1 RFC-like complex; IPI:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0031389; C:Rad17 RFC-like complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006272; P:leading strand elongation; IDA:SGD.::GO:0006298; P:mismatch repair; TAS:SGD.::GO:0007062; P:sister chromatid cohesion; IPI:SGD.
70O26343    321   RFCS_METTH Replication factor C small subunit...3561e-20     94     25     44GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
71Q2NH89    321   RFCS_METST Replication factor C small subunit...3551e-20     94     24     44GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
72Q5UP47    344   RFCS3_MIMIV Putative replication factor C sma...3082e-19     90.9     26     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
73O57852    855   RFCS_PYRHO Replication factor C small subunit...460.006     42.4     41     57
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
74Q5JHP2    866   RFCS_PYRKO Replication factor C small subunit...460.042     39.7     39     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
75Q8U4J3    852   RFCS_PYRFU Replication factor C small subunit...460.008     42     41     57
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
76Q18E75    649   RFCS_HALWD Replication factor C small subunit...470.00006     48.5     45     64
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
77Q8TZC4    635   RFCS_METKA Replication factor C small subunit...590.0000005     55.1     42     61
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
78Q5UQ47    319   RFCS1_MIMIV Putative replication factor C sma...2460.00000000008     65.9     23     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
79A5UMF4    492   RFCL_METS3 Replication factor C large subunit...2510.000000001     62.8     25     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
80A4FZL6    484   RFCL_METM5 Replication factor C large subunit...2650.000000004     61.2     24     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
81A9A6N2    484   RFCL_METM6 Replication factor C large subunit...2650.00000003     58.5     23     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
82A6VIW1    482   RFCL_METM7 Replication factor C large subunit...2650.00000003     58.5     23     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
83Q6M0E9    486   RFCL_METMP Replication factor C large subunit...2650.00000008     57.4     23     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
84Q58294    516   RFCL_METJA Replication factor C large subunit...2630.0000002     56.6     24     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
85O29072    479   RFCL_ARCFU Replication factor C large subunit...2480.0000002     55.8     24     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
86A6UWR5    474   RFCL_META3 Replication factor C large subunit...3070.0000004     55.5     23     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
87A0B6D7    467   RFCL_METTP Replication factor C large subunit...2490.0000004     55.1     22     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
88Q2NH88    534   RFCL_METST Replication factor C large subunit...3050.0000005     54.7     24     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
89Q9V2G4    1437   RFCS_PYRAB Replication factor C small subunit...460.008     42     41     54
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:InterPro.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
90P60373    430   RFCL_NANEQ Replication factor C large subunit...2400.000001     53.1     23     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
91O26342    479   RFCL_METTH Replication factor C large subunit...3050.000002     53.1     23     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
records
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