UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YBR087W

Length:

354

Number of sequences:

5887

Description:

YBR087W RFC5 SGDID:S000000291, Chr II from 423765-424829, Genome Release 64-1-1, Verified ORF, "Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
151	Q49V34	820	CLPC_STAS1 ATP-dependent Clp protease ATP-bin...	49	0.31	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
152	P37571	810	CLPC_BACSU Negative regulator of genetic comp...	49	0.34	36.6	35	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0030420; P:establishment of competence for transformation; IEA:UniProtKB-KW.::GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
153	Q4L3I4	824	CLPC_STAHJ ATP-dependent Clp protease ATP-bin...	49	0.37	36.6	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
154	Q3AND8	348	RUVB_SYNSC Holliday junction ATP-dependent DN...	59	0.4	36.2	37	49
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
155	Q0IDW1	359	RUVB_SYNS3 Holliday junction ATP-dependent DN...	59	0.4	36.2	36	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
156	Q7V910	352	RUVB_PROMM Holliday junction ATP-dependent DN...	59	0.41	36.2	37	46
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
157	B7K9M6	366	RUVB_CYAP7 Holliday junction ATP-dependent DN...	55	0.46	35.8	40	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
158	Q54MH9	1401	RFC1_DICDI Probable replication factor C subu...	250	0.55	36.2	20	43	GO:0005663; C:DNA replication factor C complex; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
									GO:0006272; P:leading strand elongation; ISS:dictyBase.::GO:0006298; P:mismatch repair; ISS:dictyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
159	C3NHF4	405	RFCL_SULIN Replication factor C large subunit...	60	0.56	35.8	35	52
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
160	A5GI46	365	RUVB_SYNPW Holliday junction ATP-dependent DN...	59	0.56	35.8	37	46
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
161	A8FUX0	338	RUVB_SHESH Holliday junction ATP-dependent DN...	50	0.58	35.4	36	56
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
162	P47658	597	DPO3X_MYCGE DNA polymerase III subunit gamma/...	241	0.64	35.8	24	41	GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
163	Q1GTY0	225	LOLD_SPHAL Lipoprotein-releasing system ATP-b...	85	0.8	34.7	27	42	GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0042954; F:lipoprotein transporter activity; IEA:InterPro.
164	B0U2E8	439	TOLB_XYLFM Protein TolB OS=Xylella fastidiosa...	37	0.86	35	32	65	GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
									GO:0017038; P:protein import; IEA:InterPro.
165	Q9PC84	439	TOLB_XYLFA Protein TolB OS=Xylella fastidiosa...	37	0.86	35	32	65	GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
									GO:0017038; P:protein import; IEA:InterPro.
166	Q7VQF3	872	CLPB_BLOFL Chaperone protein ClpB OS=Blochman...	49	0.86	35.4	33	51	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0016485; P:protein processing; IEA:InterPro.::GO:0009408; P:response to heat; IEA:InterPro.
167	B1KGX9	338	RUVB_SHEWM Holliday junction ATP-dependent DN...	50	0.88	35	34	56
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
168	Q8P6F2	439	TOLB_XANCP Protein TolB OS=LMG 568). GN=tolB ...	63	0.88	35	25	56	GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
									GO:0017038; P:protein import; IEA:InterPro.
169	B0RPZ2	439	TOLB_XANCB Protein TolB OS=Xanthomonas campes...	63	0.88	35	25	56	GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
									GO:0017038; P:protein import; IEA:InterPro.
170	Q4UXL2	439	TOLB_XANC8 Protein TolB OS=Xanthomonas campes...	63	0.88	35	25	56	GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
									GO:0017038; P:protein import; IEA:InterPro.
171	Q9XT62	670	RAD17_CHLAE Cell cycle checkpoint protein RAD...	55	0.91	35	42	60	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
									GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:InterPro.
172	Q87CZ5	439	TOLB_XYLFT Protein TolB OS=Xylella fastidiosa...	37	0.91	35	32	65	GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
									GO:0017038; P:protein import; IEA:InterPro.
173	Q3B0J1	347	RUVB_SYNS9 Holliday junction ATP-dependent DN...	59	0.94	35	36	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
174	O75943	681	RAD17_HUMAN Cell cycle checkpoint protein RAD...	55	0.94	35	42	60	GO:0005654; C:nucleoplasm; TAS:Reactome.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
									GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000077; P:DNA damage checkpoint; IMP:UniProtKB.::GO:0006281; P:DNA repair; TAS:ProtInc.::GO:0006260; P:DNA replication; TAS:Reactome.::GO:0000076; P:DNA replication checkpoint; TAS:ProtInc.::GO:0007093; P:mitotic cell cycle checkpoint; IMP:UniProtKB.::GO:0008156; P:negative regulation of DNA replication; IMP:UniProtKB.::GO:0042325; P:regulation of phosphorylation; IMP:UniProtKB.
175	A9L3H7	334	RUVB_SHEB9 Holliday junction ATP-dependent DN...	50	0.99	34.7	34	56
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
176	A6WNQ2	334	RUVB_SHEB8 Holliday junction ATP-dependent DN...	50	0.99	34.7	34	56
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
177	Q5R652	681	RAD17_PONAB Cell cycle checkpoint protein RAD...	55	1	35	42	60	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:InterPro.
178	A3D481	334	RUVB_SHEB5 Holliday junction ATP-dependent DN...	50	1	34.7	34	56
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
179	Q8EEF3	334	RUVB_SHEON Holliday junction ATP-dependent DN...	50	1	34.7	34	56
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
180	B8EA75	334	RUVB_SHEB2 Holliday junction ATP-dependent DN...	50	1	34.7	34	56
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
181	A1ARF8	338	RUVB_PELPD Holliday junction ATP-dependent DN...	47	1	34.7	38	55
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.

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