UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YBR087W

Length:

354

Number of sequences:

5887

Description:

YBR087W RFC5 SGDID:S000000291, Chr II from 423765-424829, Genome Release 64-1-1, Verified ORF, "Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
121	Q8TPU4	607	RFCL_METAC Replication factor C large subunit...	248	0.022	40.4	19	42
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
122	P09122	563	DPO3X_BACSU DNA polymerase III subunit gamma/...	233	0.025	40	24	44	GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
123	Q8KBK0	804	FTSK_CHLTE DNA translocase FtsK OS=Chlorobium...	123	0.041	39.7	29	45	GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.
124	Q0W3P4	553	RFCL_UNCMA Replication factor C large subunit...	243	0.041	39.3	21	42
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
125	P52024	328	HOLB_PSEAE DNA polymerase III subunit delta' ...	171	0.046	38.9	23	44
									GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
126	Q8Q084	610	RFCL_METMA Replication factor C large subunit...	253	0.053	39.3	21	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
127	A8AC24	476	RFCL_IGNH4 Replication factor C large subunit...	249	0.065	38.9	25	40	GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
128	P74876	642	DPO3X_SALTY DNA polymerase III subunit tau OS...	101	0.072	38.9	26	53	GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
129	A2BL93	484	RFCL_HYPBU Replication factor C large subunit...	246	0.092	38.1	22	42
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
130	A3CTR4	454	RFCL_METMJ Replication factor C large subunit...	54	0.092	38.1	37	50
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
131	Q97BC2	420	RFCL_THEVO Replication factor C large subunit...	64	0.11	37.7	36	52
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
132	A2C638	352	RUVB_PROM3 Holliday junction ATP-dependent DN...	59	0.22	37	39	46
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
133	C3NE95	405	RFCL_SULIY Replication factor C large subunit...	60	0.24	37	37	52
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
134	C3MVD2	405	RFCL_SULIM Replication factor C large subunit...	60	0.24	37	37	52
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
135	C3MQ13	405	RFCL_SULIL Replication factor C large subunit...	60	0.24	37	37	52
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
136	C4KHA7	405	RFCL_SULIK Replication factor C large subunit...	60	0.24	37	37	52
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
137	C3N5N1	405	RFCL_SULIA Replication factor C large subunit...	60	0.24	37	37	52
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
138	Q8CQ88	817	CLPC_STAES ATP-dependent Clp protease ATP-bin...	49	0.27	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
139	Q5HRM8	817	CLPC_STAEQ ATP-dependent Clp protease ATP-bin...	49	0.27	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
140	Q8NXY8	818	CLPC_STAAW ATP-dependent Clp protease ATP-bin...	49	0.28	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
141	Q6GBW3	818	CLPC_STAAS ATP-dependent Clp protease ATP-bin...	49	0.29	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
142	Q6GJE4	818	CLPC_STAAR ATP-dependent Clp protease ATP-bin...	49	0.29	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
143	Q7A797	818	CLPC_STAAN ATP-dependent Clp protease ATP-bin...	49	0.29	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
144	Q99W78	818	CLPC_STAAM ATP-dependent Clp protease ATP-bin...	49	0.29	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
145	P0C281	818	CLPC_STAAC ATP-dependent Clp protease ATP-bin...	49	0.29	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
146	Q2G0P5	818	CLPC_STAA8 ATP-dependent Clp protease ATP-bin...	49	0.29	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0019538; P:protein metabolic process; IEA:InterPro.
147	Q2FJB5	818	CLPC_STAA3 ATP-dependent Clp protease ATP-bin...	49	0.29	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
148	Q2YSD6	818	CLPC_STAAB ATP-dependent Clp protease ATP-bin...	49	0.29	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
149	A2C563	356	RUVB_PROM1 Holliday junction ATP-dependent DN...	59	0.3	36.6	36	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
150	Q46IJ6	356	RUVB_PROMT Holliday junction ATP-dependent DN...	59	0.3	36.6	36	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
151	Q49V34	820	CLPC_STAS1 ATP-dependent Clp protease ATP-bin...	49	0.31	37	33	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.

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