Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBR073W
Length:
958
Number of sequences:
5887
Description:
YBR073W RDH54 SGDID:S000000277, Chr II from 383112-385988, Genome Release 64-1-1, Verified ORF, "DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in recombinational repair of DNA double-strand breaks during mitosis and meiosis; proposed to be involved in crossover interference"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38086    958   RDH54_YEAST DNA repair and recombination prot...9580     1981     100     100GO:0005634; C:nucleus; IC:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003916; F:DNA topoisomerase activity; IEA:UniProtKB-KW.::GO:0015616; F:DNA translocase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0032392; P:DNA geometric change; IDA:SGD.::GO:0000727; P:double-strand break repair via break-induced replication; TAS:SGD.::GO:0030491; P:heteroduplex formation; IDA:SGD.::GO:0045144; P:meiotic sister chromatid segregation; IMP:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.
2A6ZL17    924   RDH54_YEAS7 DNA repair and recombination prot...9240     1907     99     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003916; F:DNA topoisomerase activity; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.
3C7GQI8    924   RDH54_YEAS2 DNA repair and recombination prot...9240     1906     99     99GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003916; F:DNA topoisomerase activity; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.
4B3LN76    924   RDH54_YEAS1 DNA repair and recombination prot...9240     1905     99     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003916; F:DNA topoisomerase activity; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.
5B5VE38    924   RDH54_YEAS6 DNA repair and recombination prot...9240     1903     99     99GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003916; F:DNA topoisomerase activity; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.
6Q9Y620    910   RA54B_HUMAN DNA repair and recombination prot...8231e-139     447     37     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003678; F:DNA helicase activity; TAS:ProtInc.::GO:0015616; F:DNA translocase activity; IDA:MGI.::GO:0003724; F:RNA helicase activity; TAS:ProtInc.
GO:0000724; P:double-strand break repair via homologous recombination; IDA:MGI.::GO:0006312; P:mitotic recombination; TAS:ProtInc.::GO:0007131; P:reciprocal meiotic recombination; TAS:ProtInc.
7Q9DG67    918   RA54B_CHICK DNA repair and recombination prot...8808e-134     431     36     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
8Q6PFE3    886   RA54B_MOUSE DNA repair and recombination prot...6092e-133     429     41     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
9P41410    852   RAD54_SCHPO DNA repair protein rhp54 OS=Schiz...5922e-125     407     40     57GO:0005634; C:nucleus; IDA:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0015616; F:DNA translocase activity; ISS:PomBase.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0033170; F:protein-DNA loading ATPase activity; TAS:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0000724; P:double-strand break repair via homologous recombination; ISS:PomBase.::GO:0030491; P:heteroduplex formation; ISS:PomBase.::GO:0006311; P:meiotic gene conversion; IMP:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.
10B4MX21    784   RAD54_DROWI DNA repair and recombination prot...5924e-125     405     40     59GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
11B4KHL5    783   RAD54_DROMO DNA repair and recombination prot...5898e-124     401     39     59GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
12B4M9A8    786   RAD54_DROVI DNA repair and recombination prot...5902e-123     400     39     59GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
13B3NAN8    784   RAD54_DROER DNA repair and recombination prot...5855e-122     396     39     58GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
14B3MMA5    791   RAD54_DROAN DNA repair and recombination prot...5976e-122     396     39     56GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
15O76460    784   RAD54_DROME DNA repair and recombination prot...5861e-121     395     39     58GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; IMP:UniProtKB.::GO:0030261; P:chromosome condensation; TAS:FlyBase.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; IMP:UniProtKB.::GO:0046843; P:dorsal appendage formation; IMP:FlyBase.::GO:0045003; P:double-strand break repair via synthesis-dependent strand annealing; IMP:FlyBase.::GO:0008298; P:intracellular mRNA localization; TAS:FlyBase.::GO:0000711; P:meiotic DNA repair synthesis; IMP:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007131; P:reciprocal meiotic recombination; TAS:FlyBase.::GO:0006417; P:regulation of translation; TAS:FlyBase.::GO:0010212; P:response to ionizing radiation; IMP:UniProtKB.
16B4NXB8    784   RAD54_DROYA DNA repair and recombination prot...5851e-121     395     39     58GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
17B4JCS7    786   RAD54_DROGR DNA repair and recombination prot...5901e-121     395     39     58GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
18Q09772    811   RDH54_SCHPO Meiotic recombination protein rdh...7561e-121     396     35     53GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; ISS:PomBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0000724; P:double-strand break repair via homologous recombination; IDA:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IDA:PomBase.
19Q29KH2    782   RAD54_DROPS DNA repair and recombination prot...5923e-120     392     39     56GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
20O12944    733   RAD54_CHICK DNA repair and recombination prot...5845e-120     390     40     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
21B4GS98    782   RAD54_DROPE DNA repair and recombination prot...5921e-119     390     39     56GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
22P70270    747   RAD54_MOUSE DNA repair and recombination prot...5923e-116     380     40     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051276; P:chromosome organization; IGI:MGI.::GO:0000724; P:double-strand break repair via homologous recombination; IGI:MGI.::GO:0042493; P:response to drug; IMP:MGI.::GO:0010212; P:response to ionizing radiation; IMP:MGI.
23Q92698    747   RAD54_HUMAN DNA repair and recombination prot...5922e-115     378     40     58GO:0005634; C:nucleus; TAS:ProtInc.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007126; P:meiosis; TAS:ProtInc.
24P32863    898   RAD54_YEAST DNA repair and recombination prot...6248e-114     377     37     56GO:0005634; C:nucleus; IMP:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0015616; F:DNA translocase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; IDA:SGD.::GO:0032392; P:DNA geometric change; IDA:SGD.::GO:0045003; P:double-strand break repair via synthesis-dependent strand annealing; TAS:SGD.::GO:0030491; P:heteroduplex formation; IDA:SGD.::GO:0032079; P:positive regulation of endodeoxyribonuclease activity; IDA:SGD.::GO:0000722; P:telomere maintenance via recombination; IMP:SGD.
25Q03468    1493   ERCC6_HUMAN DNA excision repair protein ERCC-...5771e-66     249     28     52GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005625; C:soluble fraction; IDA:UniProtKB.::GO:0008023; C:transcription elongation factor complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; IDA:UniProtKB.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.
GO:0006284; P:base-excision repair; IMP:UniProtKB.::GO:0032786; P:positive regulation of transcription elongation, DNA-dependent; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; NAS:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:UniProtKB.
26Q9UR24    973   RHP26_SCHPO DNA repair protein rhp26 OS=Schiz...5333e-66     244     32     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
27P40352    1085   RAD26_YEAST DNA repair and recombination prot...5555e-66     244     32     50GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:SGD.
28A2BGR3    1451   ERC6L_DANRE DNA excision repair protein ERCC-...6083e-64     241     29     48GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
29A6QQR4    1242   ERC6L_BOVIN DNA excision repair protein ERCC-...6094e-61     231     29     47GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
30Q8BHK9    1240   ERC6L_MOUSE DNA excision repair protein ERCC-...6221e-60     229     28     47GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
31P22082    1703   SNF2_YEAST Transcription regulatory protein S...5042e-60     229     31     51GO:0016514; C:SWI/SNF complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.::GO:0031492; F:nucleosomal DNA binding; IDA:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:SGD.::GO:0044109; P:cellular alcohol catabolic process; IMP:SGD.::GO:0006261; P:DNA-dependent DNA replication; IMP:SGD.::GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0042766; P:nucleosome mobilization; IDA:SGD.::GO:0031496; P:positive regulation of mating type switching; IMP:SGD.::GO:0061412; P:positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation; IMP:SGD.::GO:0042148; P:strand invasion; IMP:SGD.::GO:0005987; P:sucrose catabolic process; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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