Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBL104C
Length:
1038
Number of sequences:
5887
Description:
YBL104C SEA4 SGDID:S000000200, Chr II from 21293-18177, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the SEA (Seh1-associated) complex, a coatomer-related complex that associates dynamically with the vacuole; has an N-terminal beta-propeller fold and a C-terminal RING motif; promoter contains multiple GCN4 binding sites"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38164    1038   YBK4_YEAST WD repeat-containing protein YBL10...10380     2162     100     100GO:0097042; C:extrinsic to fungal-type vacuolar membrane; IDA:SGD.::GO:0035859; C:Seh1-associated complex; IDA:SGD.
2Q09866    905   YAG1_SCHPO Uncharacterized WD repeat-containi...1530.002     45.8     24     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
3A4QNS7    880   MIOB_XENLA WD repeat-containing protein mio-B...2060.42     38.5     24     39
4Q9NXC5    875   MIO_HUMAN WD repeat-containing protein mio OS...2050.21     39.3     26     41
5Q5RCA2    875   MIO_PONAB WD repeat-containing protein mio OS...2050.052     41.2     27     41
6Q5U5D4    880   MIOA_XENLA WD repeat-containing protein mio-A...2060.37     38.5     24     39
7Q8VE19    875   MIO_MOUSE WD repeat-containing protein mio OS...2050.47     38.1     26     40
8Q802U2    876   MIO_DANRE WD repeat-containing protein mio OS...1471.4     36.6     24     44
9Q9VQ89    867   MIO_DROME WD repeat-containing protein mio OS...1454.1     35     24     44GO:0001674; C:female germ cell nucleus; IDA:UniProtKB.::GO:0043234; C:protein complex; IPI:FlyBase.
GO:0006302; P:double-strand break repair; IMP:FlyBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0009994; P:oocyte differentiation; IMP:UniProtKB.::GO:0030716; P:oocyte fate determination; IMP:FlyBase.::GO:0040020; P:regulation of meiosis; IMP:FlyBase.
10Q551B5    1119   MIO_DICDI WD repeat-containing protein mio OS...1920.44     38.5     25     41
GO:0005488; F:binding; IEA:InterPro.
11Q5ZLG9    973   WDR59_CHICK WD repeat-containing protein 59 O...330.00005     51.2     58     61
12Q8C0M0    992   WDR59_MOUSE WD repeat-containing protein 59 O...330.00005     51.2     58     61
13Q6PJI9    974   WDR59_HUMAN WD repeat-containing protein 59 O...330.00006     50.8     58     61
14Q9VKK2    989   WDR59_DROME WD repeat-containing protein 59 h...780.00007     50.8     32     46
15Q54DS4    1823   Y2056_DICDI WD repeat-containing protein DDB_...340.0001     50.1     53     62
16O22469    424   MSI3_ARATH WD-40 repeat-containing protein MS...1700.029     41.6     24     46GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17O14021    431   PRW1_SCHPO RbAp48-related WD40 repeat-contain...1400.048     41.2     26     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0033698; C:Rpd3L complex; IDA:PomBase.::GO:0070210; C:Rpd3L-Expanded complex; IDA:PomBase.::GO:0032221; C:Rpd3S complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0006342; P:chromatin silencing; ISS:PomBase.::GO:0030261; P:chromosome condensation; IMP:PomBase.::GO:0016575; P:histone deacetylation; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18Q8VBV4    629   FBXW7_MOUSE F-box/WD repeat-containing protei...1630.23     39.3     24     45GO:0005783; C:endoplasmic reticulum; IDA:MGI.::GO:0005794; C:Golgi apparatus; IDA:MGI.::GO:0005634; C:nucleus; IDA:BHF-UCL.::GO:0048471; C:perinuclear region of cytoplasm; IDA:BHF-UCL.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0007219; P:Notch signaling pathway; IDA:MGI.::GO:0016567; P:protein ubiquitination; ISS:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
19Q969H0    707   FBXW7_HUMAN F-box/WD repeat-containing protei...1610.35     38.5     24     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0043234; C:protein complex; IDA:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0034644; P:cellular response to UV; IDA:UniProtKB.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0055088; P:lipid homeostasis; ISS:BHF-UCL.::GO:0032876; P:negative regulation of DNA endoreduplication; IMP:BHF-UCL.::GO:2000346; P:negative regulation of hepatocyte proliferation; ISS:BHF-UCL.::GO:0045746; P:negative regulation of Notch signaling pathway; ISS:BHF-UCL.::GO:2000639; P:negative regulation of SREBP-mediated signaling pathway; ISS:BHF-UCL.::GO:0010868; P:negative regulation of triglyceride biosynthetic process; ISS:BHF-UCL.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0045741; P:positive regulation of epidermal growth factor-activated receptor activity; IDA:BHF-UCL.::GO:0070374; P:positive regulation of ERK1 and ERK2 cascade; IMP:BHF-UCL.::GO:2000060; P:positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:BHF-UCL.::GO:0050821; P:protein stabilization; IDA:BHF-UCL.::GO:0016567; P:protein ubiquitination; IDA:UniProtKB.::GO:0010883; P:regulation of lipid storage; ISS:BHF-UCL.::GO:0032880; P:regulation of protein localization; ISS:BHF-UCL.::GO:0006974; P:response to DNA damage stimulus; IDA:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0007062; P:sister chromatid cohesion; IMP:BHF-UCL.::GO:0001944; P:vasculature development; TAS:BHF-UCL.
20Q54SD4    423   RBBD_DICDI Probable histone-binding protein r...2510.35     38.1     24     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21O94244    430   HAT2_SCHPO Histone acetyltransferase type B s...1350.58     37.7     25     43GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0031511; C:Mis6-Sim4 complex; TAS:PomBase.::GO:0000790; C:nuclear chromatin; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016575; P:histone deacetylation; IMP:PomBase.::GO:0051382; P:kinetochore assembly; TAS:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0070317; P:negative regulation of G0 to G1 transition; IMP:PomBase.::GO:0034501; P:protein localization to kinetochore; IGI:PomBase.::GO:0031066; P:regulation of histone deacetylation at centromere; IMP:PomBase.
22O22468    415   MSI2_ARATH WD-40 repeat-containing protein MS...1430.9     37     27     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
23Q55E54    962   COROB_DICDI Coronin-B OS=Dictyostelium discoi...991     37     28     46GO:0031252; C:cell leading edge; IDA:dictyBase.::GO:0042995; C:cell projection; IEA:UniProtKB-SubCell.::GO:0030864; C:cortical actin cytoskeleton; IDA:dictyBase.::GO:0005829; C:cytosol; IDA:dictyBase.::GO:0001891; C:phagocytic cup; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IBA:RefGenome.
GO:0051015; F:actin filament binding; IDA:dictyBase.
GO:0001667; P:ameboidal cell migration; IMP:dictyBase.::GO:0031589; P:cell-substrate adhesion; IMP:dictyBase.::GO:0030866; P:cortical actin cytoskeleton organization; IMP:dictyBase.::GO:0030835; P:negative regulation of actin filament depolymerization; IDA:dictyBase.::GO:0031276; P:negative regulation of lateral pseudopodium assembly; IMP:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.::GO:0009617; P:response to bacterium; IMP:dictyBase.
24Q6GZU9    970   027R_FRG3G Uncharacterized protein 027R OS=Fr...871.2     37     32     43
GO:0016301; F:kinase activity; IEA:UniProtKB-KW.
25Q8K0G5    386   TSSC1_MOUSE Protein TSSC1 OS=Mus musculus (Mo...1301.2     36.6     28     41
26P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...1032     35.8     25     46GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
27A7G9Q5    159   ATPF_CLOBL ATP synthase subunit b OS=Clostrid...832.6     34.3     29     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045263; C:proton-transporting ATP synthase complex, coupling factor F(o); IEA:UniProtKB-KW.
GO:0015078; F:hydrogen ion transmembrane transporter activity; IEA:InterPro.
GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
28B1IE30    159   ATPF_CLOBK ATP synthase subunit b OS=Clostrid...832.6     34.3     29     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045263; C:proton-transporting ATP synthase complex, coupling factor F(o); IEA:UniProtKB-KW.
GO:0015078; F:hydrogen ion transmembrane transporter activity; IEA:InterPro.
GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
29Q32LP9    525   COR2A_BOVIN Coronin-2A OS=Bos taurus (Bovine)...252.8     35.4     48     76GO:0015629; C:actin cytoskeleton; ISS:RefGenome.::GO:0017053; C:transcriptional repressor complex; ISS:RefGenome.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0030036; P:actin cytoskeleton organization; ISS:RefGenome.
30Q5R654    426   RBBP7_PONAB Histone-binding protein RBBP7 OS=...1473     35.4     22     46GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
31Q54JS5    1023   WDR24_DICDI WD repeat-containing protein 24 h...1023.6     35.4     24     33
records
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