Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBL103C
Length:
486
Number of sequences:
5887
Description:
YBL103C RTG3 SGDID:S000000199, Chr II from 23536-22076, Genome Release 64-1-1, reverse complement, Verified ORF, "Basic helix-loop-helix-leucine zipper (bHLH/Zip) transcription factor that forms a complex with another bHLH/Zip protein, Rtg1p, to activate the retrograde (RTG) and TOR pathways"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61O43019    793   SRE2_SCHPO Putative transcription factor sre2...1300.11     38.9     29     45GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; NAS:PomBase.
GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; TAS:PomBase.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
62P49379    359   CBF1_KLULA Centromere-binding protein 1 OS=12...630.11     38.5     33     52GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
63Q7TS99    240   HELT_MOUSE Hairy and enhancer of split-relate...820.13     37.7     37     52GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003677; F:DNA binding; IDA:MGI.::GO:0042803; F:protein homodimerization activity; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0007417; P:central nervous system development; IMP:MGI.::GO:0021858; P:GABAergic neuron differentiation in basal ganglia; IMP:MGI.::GO:0035264; P:multicellular organism growth; IMP:MGI.::GO:0010259; P:multicellular organismal aging; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0009791; P:post-embryonic development; IMP:MGI.::GO:0001967; P:suckling behavior; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
64O57868    253   NUCS_PYRHO Endonuclease NucS OS=NBRC 100139 /...1110.14     37.7     26     42
65P97460    816   NPAS2_MOUSE Neuronal PAS domain-containing pr...870.16     38.5     31     47GO:0005829; C:cytosol; TAS:Reactome.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0042745; P:circadian sleep/wake cycle; IMP:MGI.::GO:0045475; P:locomotor rhythm; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
66Q9ZUG9    350   BH066_ARATH Transcription factor bHLH66 OS=Ar...700.16     38.1     33     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0080147; P:root hair cell development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
67Q99743    824   NPAS2_HUMAN Neuronal PAS domain-containing pr...870.19     38.1     31     47GO:0005829; C:cytosol; TAS:Reactome.::GO:0005667; C:transcription factor complex; IPI:MGI.
GO:0003677; F:DNA binding; IPI:MGI.::GO:0051879; F:Hsp90 protein binding; IDA:BHF-UCL.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0007417; P:central nervous system development; TAS:ProtInc.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
68Q8QGQ6    875   CLOCK_CHICK Circadian locomoter output cycles...930.21     38.1     29     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; IEA:InterPro.
69Q99081    682   HTF4_HUMAN Transcription factor 12 OS=Homo sa...1000.21     37.7     33     49GO:0005634; C:nucleus; IDA:LIFEdb.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006955; P:immune response; TAS:ProtInc.::GO:0007517; P:muscle organ development; TAS:ProtInc.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
70Q8S3D5    310   BH069_ARATH Transcription factor bHLH69 OS=Ar...670.21     37.4     31     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0080147; P:root hair cell development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
71Q6YGZ4    851   CLOCK_TYTAL Circadian locomoter output cycles...930.21     38.1     29     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
72Q5ZQU2    815   NPAS2_CHICK Neuronal PAS domain-containing pr...870.22     37.7     32     47GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
73Q9LSQ3    297   BH082_ARATH Transcription factor bHLH82 OS=Ar...550.23     37.4     36     58GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0080147; P:root hair cell development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
74Q9V2E8    251   NUCS_PYRAB Endonuclease NucS OS=Pyrococcus ab...1250.26     37     26     45
75Q9UUD1    900   SREBP_SCHPO Sterol regulatory element-binding...1130.29     37.7     33     47GO:0071458; C:integral to cytosolic side of endoplasmic reticulum membrane; TAS:PomBase.::GO:0005634; C:nucleus; TAS:PomBase.::GO:0032936; C:SREBP-SCAP complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IMP:PomBase.
GO:0071456; P:cellular response to hypoxia; IMP:PomBase.::GO:0010629; P:negative regulation of gene expression; IEP:PomBase.::GO:0072592; P:oxygen metabolic process; IMP:PomBase.::GO:0070452; P:positive regulation of ergosterol biosynthetic process; IEP:PomBase.::GO:0070455; P:positive regulation of heme biosynthetic process; IEP:PomBase.::GO:0071073; P:positive regulation of phospholipid biosynthetic process; IEP:PomBase.::GO:0035104; P:positive regulation of transcription via sterol regulatory element binding; IMP:PomBase.::GO:0010630; P:regulation of transcription, start site selection; IEP:PomBase.::GO:0008202; P:steroid metabolic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
76Q9DG12    737   ARNT2_DANRE Aryl hydrocarbon receptor nuclear...640.31     37.4     36     53GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0046982; F:protein heterodimerization activity; NAS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; NAS:UniProtKB.::GO:0001666; P:response to hypoxia; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
77Q9WVS9    862   CLOCK_RAT Circadian locomoter output cycles p...760.32     37.4     32     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0009649; P:entrainment of circadian clock; IEP:RGD.
78Q9C670    390   BH076_ARATH Transcription factor bHLH76 OS=Ar...690.32     37     32     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0009911; P:positive regulation of flower development; IGI:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
79Q5RAK8    846   CLOCK_PONAB Circadian locomoter output cycles...760.32     37.4     32     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
80P20389    454   MYC2_MARMO N-myc 2 proto-oncogene protein OS=...950.34     37     33     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
81O15516    846   CLOCK_HUMAN Circadian locomoter output cycles...760.35     37.4     32     51GO:0005694; C:chromosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005667; C:transcription factor complex; IPI:MGI.
GO:0070888; F:E-box binding; IDA:BHF-UCL.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:BHF-UCL.::GO:0000982; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity; ISS:BHF-UCL.::GO:0001190; F:RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription; ISS:BHF-UCL.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0071479; P:cellular response to ionizing radiation; IDA:UniProtKB.::GO:0032922; P:circadian regulation of gene expression; ISS:BHF-UCL.::GO:0000077; P:DNA damage checkpoint; IMP:UniProtKB.::GO:0009648; P:photoperiodism; TAS:ProtInc.
82Q12398    434   HMS1_YEAST Probable transcription factor HMS1...790.35     37     29     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007124; P:pseudohyphal growth; IGI:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
83Q64210    454   MYC2_SPEBE N-myc 2 proto-oncogene protein OS=...950.35     37     33     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
84Q91YB0    865   CLOCK_NANGA Circadian locomoter output cycles...760.36     37.4     32     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
85P41739    800   ARNT_RAT Aryl hydrocarbon receptor nuclear tr...670.38     37     36     52
GO:0046982; F:protein heterodimerization activity; IDA:RGD.
GO:0001666; P:response to hypoxia; IEP:RGD.::GO:0009636; P:response to toxin; NAS:RGD.
86Q91YB2    865   CLOCK_SPACA Circadian locomoter output cycles...760.38     37     32     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
87P51514    707   HTF4_RAT Transcription factor 12 OS=Rattus no...1000.39     37     31     48
GO:0035497; F:cAMP response element binding; IDA:RGD.::GO:0070888; F:E-box binding; ISS:UniProtKB.::GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0046982; F:protein heterodimerization activity; ISS:UniProtKB.
GO:0045666; P:positive regulation of neuron differentiation; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
88Q2VPD4    579   BMAL2_MOUSE Aryl hydrocarbon receptor nuclear...640.39     37     31     56GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:InterPro.
89P53762    791   ARNT_MOUSE Aryl hydrocarbon receptor nuclear ...670.39     37     36     52GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0004874; F:aryl hydrocarbon receptor activity; IMP:MGI.::GO:0046982; F:protein heterodimerization activity; IPI:MGI.::GO:0003713; F:transcription coactivator activity; IDA:MGI.
GO:0030154; P:cell differentiation; IMP:MGI.::GO:0001892; P:embryonic placenta development; IMP:MGI.::GO:0033235; P:positive regulation of protein sumoylation; IDA:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0001666; P:response to hypoxia; IDA:MGI.::GO:0009636; P:response to toxin; TAS:MGI.
90Q9BE97    790   ARNT_BOVIN Aryl hydrocarbon receptor nuclear ...670.42     37     36     52GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
91O02219    453   AHA1_CAEEL Aryl hydrocarbon receptor nuclear ...610.45     36.6     38     54GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IDA:WormBase.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0001085; F:RNA polymerase II transcription factor binding; IPI:WormBase.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0001708; P:cell fate specification; IMP:UniProtKB.::GO:0030522; P:intracellular receptor mediated signaling pathway; TAS:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:WormBase.::GO:0009410; P:response to xenobiotic stimulus; IDA:WormBase.::GO:0035176; P:social behavior; IMP:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; IDA:WormBase.
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