Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBL100W-B
Length:
1770
Number of sequences:
5887
Description:
YBL100W-B YBL100W-B SGDID:S000002149, Chr II from 29935-31227,31229-35248, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P0CX66    440   YE12A_YEAST Transposon Ty1-ER2 Gag polyprotei...4357e-129     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
62P0CX65    440   YD14A_YEAST Transposon Ty1-DR5 Gag polyprotei...4357e-129     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
63Q12485    440   YG12A_YEAST Transposon Ty1-GR2 Gag polyprotei...4358e-129     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
64Q03856    440   YD11A_YEAST Transposon Ty1-DR1 Gag polyprotei...4358e-129     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
65Q12441    440   YD12A_YEAST Transposon Ty1-DR3 Gag polyprotei...4358e-129     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
66P0C2I8    440   YL14A_YEAST Transposon Ty1-LR4 Gag polyprotei...4352e-128     415     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
67P0CX60    440   YP13A_YEAST Transposon Ty1-PR2 Gag polyprotei...4356e-128     413     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
68P0CX59    440   YO12A_YEAST Transposon Ty1-OR Gag polyprotein...4356e-128     413     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
69Q04706    440   YM11A_YEAST Transposon Ty1-ML1 Gag polyprotei...4356e-128     413     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
70Q12217    440   YB12A_YEAST Transposon Ty1-BR Gag polyprotein...4352e-127     412     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
71P0CX76    440   YM12A_YEAST Transposon Ty1-ML2 Gag polyprotei...4354e-127     411     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
72P0CX75    440   YL13A_YEAST Transposon Ty1-LR3 Gag polyprotei...4354e-127     411     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
73P0CX74    440   YJ11A_YEAST Transposon Ty1-JR1 Gag polyprotei...4354e-127     411     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
74P08405    440   TY1A_YEASX Transposon TyH3 Gag polyprotein OS...4352e-126     409     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
75Q92392    440   YO11A_YEAST Transposon Ty1-OL Gag polyprotein...4353e-126     409     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
76P0CX73    440   YP11A_YEAST Transposon Ty1-PL Gag polyprotein...4355e-126     408     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
77P0CX72    440   YL12A_YEAST Transposon Ty1-LR2 Gag polyprotei...4355e-126     408     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
78P0CX71    440   YE11A_YEAST Transposon Ty1-ER1 Gag polyprotei...4355e-126     408     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
79P0CX70    440   YD15A_YEAST Transposon Ty1-DR6 Gag polyprotei...4355e-126     408     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
80O74302    440   YD13A_YEAST Transposon Ty1-DR4 Gag polyprotei...4356e-126     407     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
81Q6Q5H1    440   YP14A_YEAST Transposon Ty1-PR3 Gag polyprotei...4358e-125     404     50     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
82Q12470    440   YN12A_YEAST Transposon Ty1-NL2 Gag polyprotei...4352e-123     400     49     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
83P0C2I4    478   YH11A_YEAST Transposon Ty1-H Gag polyprotein ...4737e-123     400     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
84P47099    440   YJ12A_YEAST Transposon Ty1-JR2 Gag polyprotei...4358e-122     396     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
85Q12085    440   YG11A_YEAST Transposon Ty1-GR1 Gag polyprotei...4359e-122     395     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
86P0CX58    440   YP12A_YEAST Transposon Ty1-PR1 Gag polyprotei...4352e-120     392     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
87P0CX57    440   YA11A_YEAST Transposon Ty1-A Gag polyprotein ...4352e-120     392     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
88Q12391    440   YN11A_YEAST Transposon Ty1-NL1 Gag polyprotei...4355e-117     382     48     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
89Q03964    440   YD17A_YEAST Transposon Ty1-DR2 Gag polyprotei...4351e-110     364     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
90Q04215    440   YM13A_YEAST Transposon Ty1-MR1 Gag polyprotei...4351e-106     353     46     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
91Q12266    440   YB11A_YEAST Transposon Ty1-BL Gag polyprotein...4357e-106     351     46     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 111 61 - 90
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::